PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIUR3_13720-P1

Organism

Triticum urartu

Taxonomic ID

4572

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

BES1

Protein Properties

Length: 245aa MW: 25645.5 Da PI: 6.6142

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIUR3_13720-P1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	30.4	1.3e-09	2	78	72	149
DUF822 72 gskpleeaeaagssasaspesslqsslkssalaspvesysaspksssfpspssldsislasa.......asllpvlsvlslvsss 149 g++p e+++ +g+s s sp+ss+q +sp++sy+asp+sssfps +s+ +++++++ + +lp+l++ s++++s TRIUR3_13720-P1 2 GCRPAERMDGIGCSVSPSPCSSYQ--------PSPRASYNASPTSSSFPSGASSPFLPHSNNmvngvdaTPILPWLQTFSNSTAS 78 899*********************........99999999999999999999999999988889998889999999999887766 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	1.4E-10	2	72	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated

Sequence ? help Back to Top
Protein Sequence Length: 245 aa Download sequence Send to blast
MGCRPAERMD GIGCSVSPSP CSSYQPSPRA SYNASPTSSS FPSGASSPFL PHSNNMVNGV 60 DATPILPWLQ TFSNSTASNK RPHLPPLLIH GGSISAPVTP PLSSPTARTP RMKTDWDESV 120 IQPPWHGSNS PCVISSTSPS SPTFSLMSSN PFSVFKEAIP GGGSSRMCTP GQSGTCSPVI 180 PGMARHPDVH MMDVVSDEFA FGSSTNGGAQ QATAGLVRAW EGERIHEDSG SDELELTLGS 240 SRTRS

Functional Description ? help Back to Top
Source	Description
UniProt	May function in brassinosteroid signaling. {ECO:0000250}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HG670306	1e-162	HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020188462.1	1e-146	protein BZR1 homolog 2
Swissprot	Q0JPT4	1e-116	BZR2_ORYSJ; Protein BZR1 homolog 2
TrEMBL	M7ZMN0	1e-175	M7ZMN0_TRIUA; Uncharacterized protein
STRING	TRIUR3_13720-P1	1e-176	(Triticum urartu)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1366	38	112

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78700.1	3e-35	BES1/BZR1 homolog 4

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764]