PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_13794-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 262aa    MW: 28886.7 Da    PI: 7.6152
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_13794-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR149.71.2e-15173252190
             FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                      +fYn Y+ e+GF vr +ks+ + +  +  +++ vC + gk+ +e+++         + r+gC+a++++  ++d+ w++++ + +HnH+l+
  TRIUR3_13794-P1 173 EFYNLYSWECGFGVRLAKSRLNVER-KRCMQEIVCACAGKPLRENSR---------SARCGCNAMIRLLWSNDKGWYIAEHKDDHNHPLS 252
                      6*****************9999554.578899********9987655.........99******************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031014.5E-12173252IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    Send to blast
MSTNGVEING YVLFSLRPTV FATNRHRFGA FLTELAAPSI HRISAASGAR STSVLPLESQ  60
DSMSVPNDVF AAAGCARPHV DAVVGEVCSE ATSGWTRSCI GLRGWEHCGS QLISLDDAGS  120
WVRVGKAPEE REMNPNRISA LELSVRAYTE KRDGPVVYPS IGTSFDSLDE AYEFYNLYSW  180
ECGFGVRLAK SRLNVERKRC MQEIVCACAG KPLRENSRSA RCGCNAMIRL LWSNDKGWYI  240
AEHKDDHNHP LSLMCGQKCR GT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020155776.11e-115protein FAR1-RELATED SEQUENCE 5-like
TrEMBLM7Z2F50.0M7Z2F5_TRIUA; Uncharacterized protein
STRINGTRIUR3_13794-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP6191991
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80010.15e-13FAR1-related sequence 8