PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIUR3_14306-P1

Organism

Triticum urartu

Taxonomic ID

4572

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WRKY

Protein Properties

Length: 232aa MW: 26078.1 Da PI: 7.1499

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIUR3_14306-P1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	51.4	2.1e-16	111	176	3	58
-SS-EEEEEEE--TT-SS-EEEEEE-ST..T---EEEEEE-SSSTTE........EEEEEES--SS CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa..gCpvkkkversaedpkv........veitYegeHnh 58 Dg++WrKYGqK+++g ++ rsYY+C+++ +C+++k +++++++ ++ +++Y g+H + TRIUR3_14306-P1 111 DGHHWRKYGQKKINGRQHVRSYYKCAYTerNCSATKTIQQQEHNRTLncedetpkYIVVYYGHHSC 176 9**********************99888*******988665432121112267888888877 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.20.25.80	3.2E-20	95	177	IPR003657	WRKY domain
SuperFamily	SSF118290	7.06E-17	103	177	IPR003657	WRKY domain
SMART	SM00774	7.2E-21	109	178	IPR003657	WRKY domain
Pfam	PF03106	3.4E-20	111	177	IPR003657	WRKY domain
PROSITE profile	PS50811	14.917	111	154	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 232 aa Download sequence Send to blast
EMDSLLRRQQ ELVIQLRALI LPALRDSRSA GLAVDLFDGV IDCINGVISR LQSITAAGGE 60 SAAAFVLGNV ISNGAGEGQE EKPVISNAGQ KRRRNNEKRS RSLVTIVPHY DGHHWRKYGQ 120 KKINGRQHVR SYYKCAYTER NCSATKTIQQ QEHNRTLNCE DETPKYIVVY YGHHSCRDDN 180 TRNGTNNDPC MDLTQSGKMA GAATDFEKFD QGDLDMSSLM EVFDNPELNW NI

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020167912.1	1e-118	probable WRKY transcription factor 70
TrEMBL	T1M9Q3	1e-175	T1M9Q3_TRIUA; Uncharacterized protein
STRING	TRIUR3_14306-P1	1e-176	(Triticum urartu)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP15881	9	13

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G01900.1	4e-14	WRKY DNA-binding protein 62