PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_14925-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 511aa    MW: 57804.3 Da    PI: 9.877
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_14925-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3474.7e-152781799
                     E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
               B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                     v+p  f++++ggk    +t++le+++g++++v +  + + +r++l++GW +Fv+an+++e+ +++F++ g+++f  +v++f++
  TRIUR3_14925-P1  2 VIPEWFVNQFGGKI--WRTVKLESPNGNVYDVGV--TENMNRTILKSGWASFVDANKIEENYSLMFRYLGNTRF--KVTIFDS 78
                     79999**9999994..559***************..**********************************9999..9999986 PP
2B344.42.9e-144255081599
                      -EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS
               B3  15 rlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 
                        +l k++++ h gkk + + l+l+   ++r W+ +l  r++ +r+++ kGW  F++ n+L++gD ++Fkl+++ +  +++v ++r+
  TRIUR3_14925-P1 425 SRYLQKQYFTGHRGKK-NVISLVLQReGKSRMWDTEL--RRGIDRMMICKGWVAFARGNHLQVGDLCLFKLMESeEPLKMMVYIIRR 508
                      4567788888886554.4466888774566*******..********************************9888*********998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM010198.3E-4179IPR003340B3 DNA binding domain
PROSITE profilePS5086312.985179IPR003340B3 DNA binding domain
PfamPF023623.0E-13278IPR003340B3 DNA binding domain
CDDcd100171.17E-14277No hitNo description
SuperFamilySSF1019367.46E-17283IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.103.4E-17280IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.103.2E-10133225IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.41E-9134227IPR015300DNA-binding pseudobarrel domain
CDDcd100171.56E-8138229No hitNo description
SMARTSM010190.066140234IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.104.6E-14389511IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.96E-12394511IPR015300DNA-binding pseudobarrel domain
CDDcd100174.34E-14398507No hitNo description
SMARTSM010191.9E-4400509IPR003340B3 DNA binding domain
PfamPF023626.4E-12425508IPR003340B3 DNA binding domain
PROSITE profilePS5086311.674445509IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 511 aa     Download sequence    Send to blast
QVIPEWFVNQ FGGKIWRTVK LESPNGNVYD VGVTENMNRT ILKSGWASFV DANKIEENYS  60
LMFRYLGNTR FKVTIFDSSG KQKASCCARM GTAASDVRNP STFDVDNSSS SCGGKCDLTV  120
AQEAKIQALV EKIRSEIPVL VVQMKKTSAN FGNLIIRKDY ALKYFPCEAT NIILQLPRKN  180
KEWKCRFNPG RRNLYLGYFV HDNCVQEGDI CLFQPIAKVK EGRFTIIVHL LHKESVRRSP  240
GGTAGMTHTA TDRRTSAKTS LTARVKKTSL TAHVKEEPAT DGMAHTAHKT SHMLKFRGHI  300
SHEKYILFSS IQPDSIENLF EHKTTDRRTG AKTTLTSRVK EEPATDGEDT SSLRPEEDGD  360
NSEGASETPF VLPERASITP AQEQKVREKV EAFESTVPVY VAILNKCNVA RKSGMIITMG  420
KQYASRYLQK QYFTGHRGKK NVISLVLQRE GKSRMWDTEL RRGIDRMMIC KGWVAFARGN  480
HLQVGDLCLF KLMESEEPLK MMVYIIRREK C
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020198700.10.0B3 domain-containing protein Os03g0619600-like
TrEMBLT1MBD80.0T1MBD8_TRIUA; Uncharacterized protein
STRINGTRIUR3_14925-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP58531172
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.17e-12B3 family protein