PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_15085-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 279aa    MW: 30208.7 Da    PI: 5.8183
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_15085-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH45.31.5e-14141187455
                      HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
              HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       h ++Er+RR++iN +f eL +++P +     kK++Ka+iL  Av+Y+k+ q
  TRIUR3_15085-P1 141 EHVMAERKRREKINRRFIELSTVIPGL-----KKMDKATILSDAVRYVKEQQ 187
                      699************************.....9****************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.796137186IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.0E-17141196IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.8E-12141187IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.02E-16142191No hitNo description
SuperFamilySSF474592.75E-16142195IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.6E-15143192IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    Send to blast
MDDSNMFIQW AMETLEQEQD GAATGHVFPS SVLELDNSAA PQNGTHMAAY RHRATDSWSS  60
GDSGAAVAVE NDGWSSNCST NHPAASWNFT SVIPHPPSII EEATPSPPAA PSHVVPEMAQ  120
RSPQSRKSSG ASTGMVPTVQ EHVMAERKRR EKINRRFIEL STVIPGLKKM DKATILSDAV  180
RYVKEQQEKL KALQDRDVRS IDSVVLVKRP CISNSDDGCP SPPPSAAAGG GPPTTRIPLP  240
EIEARISESN VLVDEGFTVT ADDIVWKLDS ALRRHHSGN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1145150ERKRRE
2146151RKRREK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3646678e-59AK364667.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2027G10.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020171135.11e-180transcription factor bHLH18-like
TrEMBLM7ZK330.0M7ZK33_TRIUA; Transcription factor bHLH19
STRINGTRIUR3_15085-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP92731143
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.12e-22bHLH family protein