PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_15779-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family G2-like
Protein Properties Length: 743aa    MW: 82188.6 Da    PI: 7.4992
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_15779-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like97.11.3e-30106159255
          G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                      prlrWtp+LH +F++ave+LGG+e+AtPk +l++m+v gL+++hvkSHLQ+YR+
  TRIUR3_15779-P1 106 PRLRWTPDLHMAFIRAVERLGGQERATPKLVLQMMNVRGLSIAHVKSHLQMYRS 159
                      8****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.606.5E-28102160IPR009057Homeodomain-like
PROSITE profilePS5129412.702102162IPR017930Myb domain
SuperFamilySSF466891.56E-13105160IPR009057Homeodomain-like
TIGRFAMsTIGR015577.3E-22106161IPR006447Myb domain, plants
PfamPF002499.0E-9107158IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 743 aa     Download sequence    Send to blast
MITREEERII GDVEDKQVLA KITMDDRKRS MSGRTLDLNE GIDMESDDGE VGDDNDEEEE  60
DGGSTTDVAG SRSSSNNSST NHASETQQGT GAGEHRVRQY NRSKLPRLRW TPDLHMAFIR  120
AVERLGGQER ATPKLVLQMM NVRGLSIAHV KSHLQMYRSK KLDHHGQRIR GAISSGSHQS  180
QKFRSNSPKT LVLMRGYSSS TCGHVVSAVF SPMDFHSMRG DRRFHDMLLQ RAAALSSTAE  240
RGGFFVSRNG GGGGGNTNSR LYGILQHQHR PSPMQSGFKN GSFRNQDWAF DHRDMMARND  300
VKASSTTSHF FASSSVRRWP LTSAVAGAGE QRRDESFGYF TGHGSGPLSR AMAVAPATSV  360
VPGEGNHRLP FRWHGGDGGK VAKAISSDPV MIVEALDSQK QKHLEQQRAL MTPADKVRLP  420
VETPELELSL SPATAIDATD GTPSKKRKKS TAASSEQELE HANKLSISLS LMPPAASVPM  480
QRQEKTRGGS VEAVLGQIHT EIYVMFVGKF VYGVWTASPI GLRQGGPLSP FLFLLAIDPL  540
QRILECATDV GILSPIAHRH AFIRVSLYVD DAACLLNPIK HEVDALHSIL ETFGVFPDEG  600
SKEKTLATPP LLVVAAIHEN MEVDTSRMIS LNVINYQAWK GKMEDLLYVK EYWKAVFSTE  660
MPEGIQEGQW KECLGLHFED QRSLGVFKQF QASVNRETDK KIKCIRTDNG GEYIGPFDPY  720
CKQQEDHTIE DIVKTKGHVS PEQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A9e-18107161458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B9e-18107161458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A9e-18107161458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C9e-18107161458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D9e-18107161458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F9e-18107161458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H9e-18107161458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J9e-18107161458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1444448KKRKK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703065e-59HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020187256.10.0uncharacterized protein LOC109772958 isoform X1
TrEMBLT1MDN80.0T1MDN8_TRIUA; Uncharacterized protein
STRINGTRIUR3_15779-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27543686
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.15e-35G2-like family protein