PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_15911-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C2H2
Protein Properties Length: 131aa    MW: 14147.1 Da    PI: 10.2228
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_15911-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.10.000144062123
                     EEETTTTEEESSHHHHHHHHHHT CS
          zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                     ++C+ Cg+sF++   L  H  +H
  TRIUR3_15911-P1 40 FVCKTCGRSFPSFQALGGHRTSH 62
                     89**********99998888777 PP
2zf-C2H213.50.0002189111123
                      EEETTTTEEESSHHHHHHHHHHT CS
          zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                      ++C+ Cg  F     L  H+r+H
  TRIUR3_15911-P1  89 HQCHVCGLEFEMGQALGGHMRRH 111
                      79********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF139121.2E-114064IPR007087Zinc finger, C2H2
SuperFamilySSF576673.35E-840111No hitNo description
SMARTSM003550.0864062IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.4084067IPR007087Zinc finger, C2H2
PROSITE patternPS0002804262IPR007087Zinc finger, C2H2
PfamPF139124.0E-1188114IPR007087Zinc finger, C2H2
PROSITE profilePS501579.70289116IPR007087Zinc finger, C2H2
SMARTSM003550.2489111IPR015880Zinc finger, C2H2-like
PROSITE patternPS00028091111IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 131 aa     Download sequence    Send to blast
MKQYRDEADA PSSLSLSLSL GAVADRSSKK MRRGGADGEF VCKTCGRSFP SFQALGGHRT  60
SHLRGRHGLA LGLTSGPGTK KTTDEKRAHQ CHVCGLEFEM GQALGGHMRR HREQESATTA  120
QAPPVLLQLF V
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in stress responses. {ECO:0000250}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By heat stress. {ECO:0000269|PubMed:18201973}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020198416.17e-68zinc finger protein ZAT8-like
SwissprotQ9LX853e-19ZAT8_ARATH; Zinc finger protein ZAT8
TrEMBLM7Z9N54e-90M7Z9N5_TRIUA; Zinc finger protein 1
STRINGTRIUR3_15911-P17e-91(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP130530117
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46080.13e-20C2H2 family protein