PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_16802-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 307aa    MW: 33147.3 Da    PI: 8.6584
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_16802-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.73.3e-30111170159
                      ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                      ++Dgy+WrKYGqK+ ++++ pr+Y+rC++a +Cpvkkkv+rsaed +vve tYegeHnh+
  TRIUR3_16802-P1 111 VKDGYQWRKYGQKVTRDNPSPRAYFRCAFApSCPVKKKVQRSAEDSSVVEATYEGEHNHP 170
                      58***************************99****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.806.7E-29104172IPR003657WRKY domain
PROSITE profilePS5081126.555106172IPR003657WRKY domain
SuperFamilySSF1182902.88E-25109172IPR003657WRKY domain
SMARTSM007746.6E-35111171IPR003657WRKY domain
PfamPF031068.9E-25112170IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    Send to blast
MTNGEARILE AKFTEVSEEN RRLTEMIGYL YANNQNFGRQ SPEGEGEQPA STAASPTSPV  60
GKKRGRESPD TSDSGDANSD KKINMVEADH VDVESPLSNG TCRRIKVKKV VKDGYQWRKY  120
GQKVTRDNPS PRAYFRCAFA PSCPVKKKVQ RSAEDSSVVE ATYEGEHNHP RPTRDGELPS  180
CATQGGGSVP CSISINSSGP TITLDLTKNG GGVQVVEAGE AQPDLKKVCR EVASPEFRAA  240
LVEQMARELT GDRKFTDALA AAIPPKPPGL IQAVFHKKKC IIGILQNREA TIHKGSVGAV  300
PPALPIH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A6e-191101721374WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription repressor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Regulates, probably indirectly, the activation of defense-related genes during defense response (By similarity). Modulates plant innate immunity against X.oryzae pv. oryzae (Xoo) (By similarity). {ECO:0000250|UniProtKB:Q6EPZ2, ECO:0000250|UniProtKB:Q6QHD1}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by biotic elicitors (e.g. fungal chitin oligosaccharide) (By similarity). Induced by pathogen infection (e.g. M.grisea and X.oryzae pv. oryzae (Xoo)) (PubMed:16528562). Accumulates after treatment with benzothiadiazole (BTH) and salicylic acid (SA) (By similarity). {ECO:0000250|UniProtKB:Q6EPZ2, ECO:0000269|PubMed:16528562}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3597060.0AK359706.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1101D16.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020147410.10.0WRKY transcription factor WRKY76-like isoform X2
SwissprotQ6IEK51e-110WRK76_ORYSI; WRKY transcription factor WRKY76
TrEMBLM7Z5250.0M7Z525_TRIUA; Putative WRKY transcription factor 40
STRINGTRIUR3_16802-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP66603552
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.14e-45WRKY DNA-binding protein 40