PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_17401-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 408aa    MW: 44574.8 Da    PI: 9.522
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_17401-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY78.57.5e-25104162258
                      --SS-EEEEEEE--TT-SS-EEEEEE-ST..T---EEEEEE-SSSTTEEEEEEES--SS CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa..gCpvkkkversaedpkvveitYegeHnh 58 
                       Dg+ WrKYGqK+++gs++pr YYrC+++  gC ++++v+rs+e+p +++i Y geH++
  TRIUR3_17401-P1 104 ADGFVWRKYGQKDINGSNHPRLYYRCAFSgeGCAATRRVQRSQEEPAAFVIAYYGEHTC 162
                      6***************************9999*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.5E-2594163IPR003657WRKY domain
SuperFamilySSF1182903.92E-2398163IPR003657WRKY domain
PROSITE profilePS5081121.80498165IPR003657WRKY domain
SMARTSM007743.2E-31103164IPR003657WRKY domain
PfamPF031061.7E-23105162IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 408 aa     Download sequence    Send to blast
MALATPTAVV LELMTMGQQS AAHLGELLRA ASPPVRAEHQ ALAAEILRCS DRVIAAVSAG  60
ATDKKRKMTD PGATSCHLPS AAMPSKRRVR AAEAHIEVQA HTTADGFVWR KYGQKDINGS  120
NHPRLYYRCA FSGEGCAATR RVQRSQEEPA AFVIAYYGEH TCGAAFCQQR AEPLPPTVVD  180
SGSNAWGVFG AVDRNRGSPL LPSLGAEHKH SAVRRHAEAP GDTSRRWSSP SSSSSYSSEV  240
ELGASPVEGF LDGNFDWDHS QRDMWQSRGW TGQLWQFCTK APGVHSIQRF ERYQVDHLVQ  300
HERHQLPAAA RPEQGGCGEA DDTHARRAAG EGRPPPAAQQ RHAAPPPPSG AAALHHLAAA  360
PEQQRQRQQQ HPVVLVGVLQ RVAVCRGGQR RGLRPEQQQQ PRRRQQQQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A3e-141051621068OsWRKY45
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703061e-160HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020186011.11e-153probable WRKY transcription factor 38
TrEMBLM8B1Y20.0M8B1Y2_TRIUA; Putative WRKY transcription factor 46
STRINGTRIUR3_17401-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP83223147
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.13e-19WRKY DNA-binding protein 46