PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIUR3_18117-P1

Organism

Triticum urartu

Taxonomic ID

4572

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bZIP

Protein Properties

Length: 1048aa MW: 115249 Da PI: 7.0051

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIUR3_18117-P1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	68.6	1e-21	291	353	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elk+++rk +NRe+ArrsR+RK+ae+eeL +++++L++eN++L+ el+++kke+++l s++ TRIUR3_18117-P1 291 ERELKKQKRKLSNRESARRSRLRKQAECEELGQRAEALKSENSSLRIELDRIKKEYEELLSKN 353 89**********************************************************998 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF07777	3.3E-24	1	96	IPR012900	G-box binding protein, multifunctional mosaic region
Pfam	PF16596	9.2E-23	124	233	No hit	No description
Gene3D	G3DSA:1.20.5.170	2.3E-14	289	349	No hit	No description
SMART	SM00338	1.9E-20	291	355	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	4.8E-20	291	353	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	12.875	293	356	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	8.04E-10	294	350	No hit	No description
CDD	cd14702	4.52E-21	296	346	No hit	No description
PROSITE pattern	PS00036	0	298	313	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0006974	Biological Process	cellular response to DNA damage stimulus
GO:0007050	Biological Process	cell cycle arrest
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 1048 aa Download sequence Send to blast
MGSNDPSTPP KASKPPEQEQ PPATTSGTTA PVYPEWPGFQ GYPAMPPHGF FPPPVAAGQA 60 HPYMWGAQHM VPPYGTPPPP YMMYPPGTVY AHPTTPGVHP FHYPMQTNGN LEPAGAQGAA 120 PGAAETNGKN EPGKTSGPSA NGVTSNSESG SDSESEGSDA NSQNDSHSKE NDVNENGSAQ 180 NGVSHSSSHG TFNKPMPLVP VQSGAVIGGV AGPATNLNIG MDYWGATGSS PVPAMRGKAP 240 SGSARGEQWT KILPLKTGMS CYVTRMFFSE KGGLLVCIPP FSPCINVGQD ERELKKQKRK 300 LSNRESARRS RLRKQAECEE LGQRAEALKS ENSSLRIELD RIKKEYEELL SKNTSLKREL 360 ERTLKQMNDL KNEHVELKKG MKEKDLEIEA KEAEIHNLKK ANVRDISSKE MDIDQPCHTP 420 ANEALHARGS CWTSTKRVSL EESAHAELER NKSKDIKTKG VQTDLPLSSG HLERKKVLMN 480 NISSNLCAIW GRPANSMLGR SLISKILASC SEEMLTLFQS ARLPDKCENS TEASSSMNNA 540 ISEVYDTIVK MNSDTIPIQT LLEALLNLCV VGNAVIVGRV LRILHSILQN LLTHGTRSNQ 600 RCILTAGAKL FVLPGRKGGV SQDDPALVSR GSPLSNTGFA LLRFYQVQFL KIGTNKVTTA 660 DCMITLFHFF IMCNLRNNVS IETYVDNNME MERNNQEHSS ALLNTPDQEE DGLHIGNMFL 720 PCTFWTPFFT GVLQIALKYS EEGIRVDALS IMILIVRTSD SKGEREKFGF ISVMESLHQL 780 LQKENALLVK KHSVHLLFLL LNCPVMLKML CSGGKDGSEL METVGCENEP QQAINSVLKD 840 LSECLTCEAT TSLGDEPFFL FGRTDVDKHW VVMTYCEDVE LKLCRLVVNL LAYIASSGKL 900 GYEVLLGSVT AHGASFLELT MEVLASQMEC KVDFSTEVHE LLNERYLLMR EVLILLNRLA 960 SHAMFSKPTL EVLMGSKRCA GLTIDIANRL PQRSKYPLRQ LNPQMANDLA DLAQKFRSRV 1020 YGFLEEQQHS TAERCDTGAS GKPLRVPR

Sequence ? help Back to Top

Protein Sequence Length: 1048 aa Download sequence Send to blast

MGSNDPSTPP KASKPPEQEQ PPATTSGTTA PVYPEWPGFQ GYPAMPPHGF FPPPVAAGQA  60
HPYMWGAQHM VPPYGTPPPP YMMYPPGTVY AHPTTPGVHP FHYPMQTNGN LEPAGAQGAA  120
PGAAETNGKN EPGKTSGPSA NGVTSNSESG SDSESEGSDA NSQNDSHSKE NDVNENGSAQ  180
NGVSHSSSHG TFNKPMPLVP VQSGAVIGGV AGPATNLNIG MDYWGATGSS PVPAMRGKAP  240
SGSARGEQWT KILPLKTGMS CYVTRMFFSE KGGLLVCIPP FSPCINVGQD ERELKKQKRK  300
LSNRESARRS RLRKQAECEE LGQRAEALKS ENSSLRIELD RIKKEYEELL SKNTSLKREL  360
ERTLKQMNDL KNEHVELKKG MKEKDLEIEA KEAEIHNLKK ANVRDISSKE MDIDQPCHTP  420
ANEALHARGS CWTSTKRVSL EESAHAELER NKSKDIKTKG VQTDLPLSSG HLERKKVLMN  480
NISSNLCAIW GRPANSMLGR SLISKILASC SEEMLTLFQS ARLPDKCENS TEASSSMNNA  540
ISEVYDTIVK MNSDTIPIQT LLEALLNLCV VGNAVIVGRV LRILHSILQN LLTHGTRSNQ  600
RCILTAGAKL FVLPGRKGGV SQDDPALVSR GSPLSNTGFA LLRFYQVQFL KIGTNKVTTA  660
DCMITLFHFF IMCNLRNNVS IETYVDNNME MERNNQEHSS ALLNTPDQEE DGLHIGNMFL  720
PCTFWTPFFT GVLQIALKYS EEGIRVDALS IMILIVRTSD SKGEREKFGF ISVMESLHQL  780
LQKENALLVK KHSVHLLFLL LNCPVMLKML CSGGKDGSEL METVGCENEP QQAINSVLKD  840
LSECLTCEAT TSLGDEPFFL FGRTDVDKHW VVMTYCEDVE LKLCRLVVNL LAYIASSGKL  900
GYEVLLGSVT AHGASFLELT MEVLASQMEC KVDFSTEVHE LLNERYLLMR EVLILLNRLA  960
SHAMFSKPTL EVLMGSKRCA GLTIDIANRL PQRSKYPLRQ LNPQMANDLA DLAQKFRSRV  1020
YGFLEEQQHS TAERCDTGAS GKPLRVPR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	293	300	LKKQKRKL
2	307	313	RRSRLRK
3	307	314	RRSRLRKQ

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK365578	0.0	AK365578.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2035D12.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024316435.1	0.0	uncharacterized protein LOC100826051
TrEMBL	M7Z6G5	0.0	M7Z6G5_TRIUA; Transcription factor HBP-1a
STRING	TRIUR3_18117-P1	0.0	(Triticum urartu)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35530.1	2e-43	basic region/leucine zipper transcription factor 16