PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_18592-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 70aa    MW: 8017.18 Da    PI: 8.8599
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_18592-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR139.71.6e-122261140
             FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegk 40
                     +fYn+YAk +GF++++ +++k k+++ i +rtf+Cs++g 
  TRIUR3_18592-P1 22 SFYNKYAKGIGFTIQRGSHHKVKNTTVIQQRTFTCSRQGM 61
                     5*************************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031012.3E-92261IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 70 aa     Download sequence    Send to blast
NCIDNSSPKI DMTFLSEEEA YSFYNKYAKG IGFTIQRGSH HKVKNTTVIQ QRTFTCSRQG  60
MGCLYFVLVI
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703061e-75HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLT1MLA32e-45T1MLA3_TRIUA; Uncharacterized protein
STRINGTRIUR3_18592-P13e-46(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1832967
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18960.12e-09FAR1-related sequence 12