PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_18658-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 600aa    MW: 68997.7 Da    PI: 8.8865
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_18658-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B350.92.9e-161751898
                     --HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
               B3 18 lpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                     +p +f++++ g+   +k+++le+++g  ++v +   k++++ vl++GW+ Fv+  gL+  D+vvF+++g+s+f  +v vf+
  TRIUR3_18658-P1  1 IPDDFLKRFRGE--IPKEIKLETRNGHIYTVGV--AKYPDKLVLRAGWETFVETYGLQIDDSVVFRYNGNSQF--NVIVFD 75
                     899***999776..7889***************..**********************************9999..777776 PP
2B351.22.3e-16288378397
                      EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEE CS
               B3   3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvk 95 
                        +++ +v+ +  l++pk+++++h g++e++  + l+   g++Wev++   +++++  + +GW++Fvk+n+++ gD+++F+l ++ ++ ++ v+
  TRIUR3_18658-P1 288 AMMSKCNVTGTFTLSVPKQYVKRHVGDTERN--ICLQC-LGKRWEVQF--GGRPEEKRIISGWRRFVKDNDVEMGDICIFELLKKcKTCTMEVH 376
                      5566777888899***********8887774..77665.89*******..99999988999********************9997777777777 PP

                      EE CS
               B3  96 vf 97 
                      ++
  TRIUR3_18658-P1 377 II 378
                      76 PP
3B336.58.6e-12504596399
                      EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEE CS
               B3   3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvk 95 
                        + + +v+ +  l+l+kk+++++ g++ +s  + le   g++ +v +   ++++   + +GW +Fvkan++++gD+++F+l ++ +   ++v+
  TRIUR3_18658-P1 504 AMMQQTNVTGRYTLSLSKKYINKYLGDEVRS--ICLER-LGERCQVWF--GRRPQDKRIIGGWTKFVKANEVEVGDICLFELLKHrKLCAMKVH 592
                      5566778888899***********8887776..77665.778888888..77777766888********************7754476678888 PP

                      EE-S CS
               B3  96 vfrk 99 
                      ++r+
  TRIUR3_18658-P1 593 IIRA 596
                      8875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019364.71E-17176IPR015300DNA-binding pseudobarrel domain
SMARTSM010190.0073180IPR003340B3 DNA binding domain
PfamPF023621.5E-12175IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.1E-16175IPR015300DNA-binding pseudobarrel domain
CDDcd100172.90E-15175No hitNo description
PROSITE profilePS5086313.225177IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.104.6E-22279379IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019369.16E-21281384IPR015300DNA-binding pseudobarrel domain
CDDcd100179.69E-19284378No hitNo description
SMARTSM010193.0E-10286381IPR003340B3 DNA binding domain
PfamPF023622.4E-14286378IPR003340B3 DNA binding domain
PROSITE profilePS5086312.915286381IPR003340B3 DNA binding domain
SuperFamilySSF1019364.84E-16495596IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.103.0E-17495597IPR015300DNA-binding pseudobarrel domain
CDDcd100176.15E-15500595No hitNo description
SMARTSM010195.6E-7502597IPR003340B3 DNA binding domain
PROSITE profilePS5086310.997502597IPR003340B3 DNA binding domain
PfamPF023628.7E-10502596IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 600 aa     Download sequence    Send to blast
IPDDFLKRFR GEIPKEIKLE TRNGHIYTVG VAKYPDKLVL RAGWETFVET YGLQIDDSVV  60
FRYNGNSQFN VIVFDRFGRE KASSVIADST PLSPYVQERH IGAPETLVRS HGHSLAPGMQ  120
SPTENVNISQ GHPQLMRVQP HTDNVSRSQG HAQHVQMQLP TDNMRRSEGH PQPIQMQSPS  180
ANVDHFVDDS RHMQMQPPTE TLNRSNCQPQ SLQMHLTCAE RQSNLQRNKS NQGNKSVARD  240
SLCLEDDTNL CETSRYTLGW NTRLNPAQKK KVDQKVEHIP SDNPIFVAMM SKCNVTGTFT  300
LSVPKQYVKR HVGDTERNIC LQCLGKRWEV QFGGRPEEKR IISGWRRFVK DNDVEMGDIC  360
IFELLKKCKT CTMEVHIIHT KDIDTPSKIC QQRHREVVKI MEHSHSLPQL KEMQLRNETV  420
EDAIVHPEPK QIQPPSLERR IRLQRDKSSQ GSKRDSLSSE DTDHEEGALP DCILARFTRL  480
TTDQKKAVKE KVQFIDSETP IFVAMMQQTN VTGRYTLSLS KKYINKYLGD EVRSICLERL  540
GERCQVWFGR RPQDKRIIGG WTKFVKANEV EVGDICLFEL LKHRKLCAMK VHIIRAKDFS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014752321.10.0putative B3 domain-containing protein Os08g0325100 isoform X1
RefseqXP_014752322.10.0putative B3 domain-containing protein Os08g0325100 isoform X1
RefseqXP_014752323.10.0putative B3 domain-containing protein Os08g0325100 isoform X1
RefseqXP_014752324.10.0putative B3 domain-containing protein Os08g0325100 isoform X1
TrEMBLT1MLG60.0T1MLG6_TRIUA; Uncharacterized protein
STRINGTRIUR3_18658-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP124821536
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.17e-14B3 family protein