PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIUR3_18957-P1

Organism

Triticum urartu

Taxonomic ID

4572

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

VOZ

Protein Properties

Length: 516aa MW: 57946.6 Da PI: 5.7747

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIUR3_18957-P1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	392.6	9.5e-121	205	438	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalne.glpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaa 93 p+p++fl+pkcalwdc+rpaqgse +qdycs++ha+la++e g+pgt+pv+rp+gidlkdg+lfaalsak+qgk+vg+p+cegaat+kspwna+ TRIUR3_18957-P1 205 PAPASFLRPKCALWDCPRPAQGSESWQDYCSMYHAELAVKEeGPPGTMPVIRPRGIDLKDGPLFAALSAKIQGKHVGVPVCEGAATTKSPWNAP 298 89***********************************9879*********************************************96 PP VOZ 94 ................elfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlye 171 elfdl ++ege++rewlffdkprraf+sgnrkqrslpdy+grgwhesrkqvmk+fgglkrsyymdpqpsss+ewhlye TRIUR3_18957-P1 299 gnflphnscsyicigtELFDLYIFEGESMREWLFFDKPRRAFDSGNRKQRSLPDYNGRGWHESRKQVMKDFGGLKRSYYMDPQPSSSYEWHLYE 392 55555555666666669************************************************************************* PP VOZ 172 yeineldalalyrlelklvdekksakgkvskdsladlqkklgrlta 217 yein+ da+alyrle+k++d+kksak+k ++++l ++q++++rl+a TRIUR3_18957-P1 393 YEINDRDAFALYRLEFKSSDAKKSAKSKFTCSPLIEIQQQMVRLSA 438 ******************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 516 aa Download sequence Send to blast
MRKGPSRSGS ARHQQFRARA KTRVDDLQDM FSGLQYARKE ARSTDAVLLE AQLHQMLREW 60 RAELSVPSPA SSLQAHKHAQ GDQDMKPEPR EEAIADPVTV AQQPTSLGPG VITTPATAGF 120 HDQMYYVNQE LSVEDFLYDD DYKINLPGSN PEILNNLEGI GHQEYLQFNL PQELPPNAYL 180 DMNNYGQNAG DGFLHMSDLL TTMSPAPASF LRPKCALWDC PRPAQGSESW QDYCSMYHAE 240 LAVKEEGPPG TMPVIRPRGI DLKDGPLFAA LSAKIQGKHV GVPVCEGAAT TKSPWNAPGN 300 FLPHNSCSYI CIGTELFDLY IFEGESMREW LFFDKPRRAF DSGNRKQRSL PDYNGRGWHE 360 SRKQVMKDFG GLKRSYYMDP QPSSSYEWHL YEYEINDRDA FALYRLEFKS SDAKKSAKSK 420 FTCSPLIEIQ QQMVRLSADG PVENKRTARA RTQDVSTNIY PVQNNTAQAN APDAYQAASQ 480 VDQMTFLNGS VVYGPHLPYG YSTEGGDFYW NSNDGA

Sequence ? help Back to Top

Protein Sequence Length: 516 aa Download sequence Send to blast

MRKGPSRSGS ARHQQFRARA KTRVDDLQDM FSGLQYARKE ARSTDAVLLE AQLHQMLREW  60
RAELSVPSPA SSLQAHKHAQ GDQDMKPEPR EEAIADPVTV AQQPTSLGPG VITTPATAGF  120
HDQMYYVNQE LSVEDFLYDD DYKINLPGSN PEILNNLEGI GHQEYLQFNL PQELPPNAYL  180
DMNNYGQNAG DGFLHMSDLL TTMSPAPASF LRPKCALWDC PRPAQGSESW QDYCSMYHAE  240
LAVKEEGPPG TMPVIRPRGI DLKDGPLFAA LSAKIQGKHV GVPVCEGAAT TKSPWNAPGN  300
FLPHNSCSYI CIGTELFDLY IFEGESMREW LFFDKPRRAF DSGNRKQRSL PDYNGRGWHE  360
SRKQVMKDFG GLKRSYYMDP QPSSSYEWHL YEYEINDRDA FALYRLEFKS SDAKKSAKSK  420
FTCSPLIEIQ QQMVRLSADG PVENKRTARA RTQDVSTNIY PVQNNTAQAN APDAYQAASQ  480
VDQMTFLNGS VVYGPHLPYG YSTEGGDFYW NSNDGA

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HG670306	0.0	HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020201118.1	0.0	transcription factor VOZ1-like
Swissprot	Q9SGQ0	1e-141	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	M7Z495	0.0	M7Z495_TRIUA; Uncharacterized protein
STRING	TRIUR3_18957-P1	0.0	(Triticum urartu)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2343	38	88

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	1e-135	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]