PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_20429-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family G2-like
Protein Properties Length: 460aa    MW: 51291.9 Da    PI: 6.6037
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_20429-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like80.81.5e-2586140156
          G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                      kpr+ Wt +LH++F+ea++q+ G ++A+Pk++lelm+v+ L++e+++SHLQkYRl+
  TRIUR3_20429-P1  86 KPRVTWTIQLHNKFLEAINQI-GLDRAVPKKVLELMNVDYLSRENIASHLQKYRLH 140
                      79*******************.********************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011011.483129IPR001789Signal transduction response regulator, receiver domain
Gene3DG3DSA:3.40.50.23001.1E-5251No hitNo description
SuperFamilySSF466899.68E-1983143IPR009057Homeodomain-like
PROSITE profilePS5129410.24683142IPR017930Myb domain
Gene3DG3DSA:1.10.10.602.0E-2684144IPR009057Homeodomain-like
TIGRFAMsTIGR015573.0E-2486140IPR006447Myb domain, plants
PfamPF002492.0E-588138IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 460 aa     Download sequence    Send to blast
MKGIEHGASD FMVKPVRTHE LKNIWQHVQR WRNPKAISHI SDHDSDVQRV QPATADKSKL  60
SGNKRNVVDD SNKHNESTCV SATHRKPRVT WTIQLHNKFL EAINQIGLDR AVPKKVLELM  120
NVDYLSRENI ASHLQKYRLH LKKVNSNHSG DAYERWNSSY NMNNKGNFMH NHEHGRWSAS  180
SSDTSSWSTN NYGATGHLAP AMNTQSNFDM GSYLHDGRML RYVGKQPSDA RRFTGFGDPP  240
VSLYNNIPNE IMLDEFPSFN YSNSYADLMC GKLMEISKGK TPSNCQSSFA NTTVGGGRSL  300
VASQVNFPQI NQLESYAMSS GRLPLQNEKA PFISNTTLVG GFTEQMAPFN MASNTSSVGT  360
MLNGSSALDA SRTSTKDNHL VNSERTTSML HNLQTDDFFS LTQLLDGGDG ASILPMQEGT  420
LDQQPLNDQL NEINAFSVDD IFSNMNLEDF TGDDPIVEEA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A3e-2384145364ARR10-B
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703060.0HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020166370.10.0two-component response regulator ORR24-like
RefseqXP_020201549.10.0two-component response regulator ORR24-like
TrEMBLM7ZEK10.0M7ZEK1_TRIUA; Two-component response regulator ARR2
STRINGTRIUR3_20429-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP15285415
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.12e-35response regulator 2