PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_20596-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 343aa    MW: 36518.8 Da    PI: 11.147
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_20596-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY69.64.6e-22288327341
                      -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE- CS
             WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkvers 41 
                      D+y+WrKYGqK++kgs++pr+YY+C++  gCp++k+ver 
  TRIUR3_20596-P1 288 DEYSWRKYGQKPIKGSPHPRGYYKCSTVrGCPARKHVERR 327
                      9************************9888*********96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105334.6E-18239284IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.801.3E-22274327IPR003657WRKY domain
PROSITE profilePS5081123.169281326IPR003657WRKY domain
SuperFamilySSF1182901.83E-18284327IPR003657WRKY domain
SMARTSM007743.4E-18286341IPR003657WRKY domain
PfamPF031063.4E-18288327IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005516Molecular Functioncalmodulin binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    Send to blast
MEEVEVANSA AVESCHKLLA LLSQQQDPAL LRSIASETGE ACAKFRKVVS LLSNGGGGRG  60
GHARGRFSRR RKPVGFLSQK GFLESSSNTP LGVLMSGSAA TPSPSAGSAG QLRPQVGAPP  120
PRSLDLVSSS SKSAHQFGPP KMVQPLSVQF QFGATAHRYP FQQQQQNLQA QMFKRSNSGI  180
SLKFDTPSGG AGTISSPRSF MSSLSMDGSV ASLDGKLPMR LLGGPAASDP LNVRQCAPKR  240
RCTGRGEDGS GKCTTGGKCH CSKRRKLRIK RSIKVPAISN KISDIPPDEY SWRKYGQKPI  300
KGSPHPRGYY KCSTVRGCPA RKHVERRIVP GLKGGGGVDK LTH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-12274326253WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3747470.0AK374747.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3075F07.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020163784.10.0protein WRKY1-like
TrEMBLM7ZA900.0M7ZA90_TRIUA; Putative WRKY transcription factor 74
STRINGTRIUR3_20596-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP28593887
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28650.13e-47WRKY DNA-binding protein 74