PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_20905-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 326aa    MW: 35464.5 Da    PI: 6.3468
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_20905-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY71.61.1e-22128187258
                      --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
                      +Dg+ WrKYGqKe++ s++pr Y+rC+++   gCp++++v++ ++d ++ +itY g+H++
  TRIUR3_20905-P1 128 EDGHIWRKYGQKEITHSKHPRLYFRCSYKhdiGCPATRQVQQPDDDLSLYVITYFGDHTC 187
                      8***************************99999*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.6E-23120187IPR003657WRKY domain
PROSITE profilePS5081118.211122185IPR003657WRKY domain
SuperFamilySSF1182904.71E-22123187IPR003657WRKY domain
SMARTSM007741.4E-32127189IPR003657WRKY domain
PfamPF031062.1E-23128187IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    Send to blast
LEVRGRESAA VLEALLQGGS PQEHGGIREL AAEILLCCDR ALAALHGRDG VHAVALASRK  60
RRSSEPDGAA SQTRPKRRLA VVVSACSGVT ISVQASKRLN KIASLRFSRM RASSGSTAMR  120
VEKRSTAEDG HIWRKYGQKE ITHSKHPRLY FRCSYKHDIG CPATRQVQQP DDDLSLYVIT  180
YFGDHTCCHG DEAVAAAEEK DVKMQPFVIN FGIGSATESS TSGSPWQNSD DGDGRSEIPR  240
SSHAVCLPEG GEADELRLKV TKVETTSLGS QPASPAAAEL SSSPDVSCAS PAWDPLSSCW  300
EWDQFVESSF DFVSRFIDFD DFGLYQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A8e-21128187968OsWRKY45
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15762SRKRRS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT2852065e-82KT285206.1 Triticum aestivum WRKY transcription factor 1 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020177391.11e-180probable WRKY transcription factor 70
TrEMBLT1MSK20.0T1MSK2_TRIUA; Uncharacterized protein
STRINGTRIUR3_20905-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP46632667
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.16e-21WRKY DNA-binding protein 70