PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_21221-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 174aa    MW: 18323.4 Da    PI: 10.2951
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_21221-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM50.75.9e-1638243128
              NAM  43 ePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk....kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      +P+dLp +  +e ++ yfFs+r+    +g r++ra + gy katgk+k+v+++    k+ l g+k+ L+f++g++    +tdWv+heyrl
  TRIUR3_21221-P1   3 DPSDLPGA--SEGESAYFFSQRQG---RGGRRRRA-AGGYGKATGKEKPVFVQlpvgKRLLAGVKTALAFHRGKS----RTDWVLHEYRL 82 
                      79***943..466889****9976...57899997.56**************999977778**********6544....79*******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100521.8111109IPR003441NAC domain
SuperFamilySSF1019417.59E-173109IPR003441NAC domain
PfamPF023656.8E-91682IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    Send to blast
MPDPSDLPGA SEGESAYFFS QRQGRGGRRR RAAGGYGKAT GKEKPVFVQL PVGKRLLAGV  60
KTALAFHRGK SRTDWVLHEY RLAGAAEQNK GANDGSQSSE WGVGRVALKS RARRTAAGGE  120
TTGDHQQEQP SPSPSSTSSC ITDHACHAPD QEPSVRTMAA AMAKVTTTAV LGCS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-1138256140Stress-induced transcription factor NAC1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3689131e-139AK368913.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2082C12.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020168455.16e-74NAC domain-containing protein 41-like
TrEMBLM7YJV21e-124M7YJV2_TRIUA; NAC domain-containing protein 2
STRINGTRIUR3_21221-P11e-125(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP128052735
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33480.28e-13NAC domain containing protein 41