PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_21266-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 501aa    MW: 57953.6 Da    PI: 6.7884
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_21266-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR180.43.3e-2528114290
             FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                      fYn+YAk++GFs+r+s+ +k +++ ++ +rtf+Cs++g+r+e+k++ e+ + +r+etr+gC+a++k++++ +g ++v+++e  HnH+la
  TRIUR3_21266-P1  28 FYNNYAKTIGFSIRRSSGHKVTNSSTFQQRTFTCSRQGHRREDKRE-ETFSYSRPETRCGCNARMKISLR-NGFYYVYEFEASHNHTLA 114
                      9******************************************999.99999******************.***************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031014.8E-2128114IPR004330FAR1 DNA binding domain
PfamPF105513.3E-29236330IPR018289MULE transposase domain
Sequence ? help Back to Top
Protein Sequence    Length: 501 aa     Download sequence    Send to blast
QETEVDDSDE RVPKLGMKFL SEEEAYLFYN NYAKTIGFSI RRSSGHKVTN SSTFQQRTFT  60
CSRQGHRRED KREETFSYSR PETRCGCNAR MKISLRNGFY YVYEFEASHN HTLAHGIMAQ  120
YLRSQRKLTE AQIANAEVAK SVGISNKATI DLMAKEAGGS ENLGFTPQDM KNCLYSKRTI  180
KAKVGDTGGV LEYLKKKVSE DVNFYYSIQV DEDELITNIF WADSKMVSDY AIFGDVICFD  240
TTYRKLDDGR PFGLIVGVNN HQKTVVFGAA LLYDETAASF GWLFINFLKV MSEKHPRTIL  300
TDEDAAMAKA IREVFPHSHH RLCVWHMNQN ARKHLAGVVD EYKKFNVDFQ HCIYDIEEEE  360
EFAGAWDKMI DNTTQRSESM NNELKRYISI KYDMLTFFEH FERLVSDKRC EEVKYDFKAT  420
QTTPKLKVES SYMLKQAAGT YTPAIFKMFQ DQVLRTLNYD TLLCDESDTK LKIYVVKFHG  480
TQQQLAQDVE KCLKIRADPD L
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703060.0HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022683537.10.0protein FAR1-RELATED SEQUENCE 5-like
TrEMBLT1MTJ50.0T1MTJ5_TRIUA; Uncharacterized protein
STRINGTRIUR3_21266-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1832967
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.14e-85FAR1-related sequence 5