PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_21721-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 185aa    MW: 21679.6 Da    PI: 9.8808
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_21721-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR163.46.5e-2024112290
             FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                      f+ eY+ ++ F+vrk+ ++ksk +g+ t+ +fvCs+eg r +  ++ ++ +  ra+trt+C+ ++++++++  +++evt++eleHnH l+
  TRIUR3_21721-P1  24 FWLEYGGHIRFDVRKRCTNKSKFDGKATSCRFVCSNEGIRWKGLTD-REPKCFRAKTRTKCRVQMVIRLDRaAENYEVTDVELEHNHYLQ 112
                      999***************************************9998.88999*******************9***************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031012.4E-1424111IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    Send to blast
MTEINKRTPQ VGMRFRDSHE ARVFWLEYGG HIRFDVRKRC TNKSKFDGKA TSCRFVCSNE  60
GIRWKGLTDR EPKCFRAKTR TKCRVQMVIR LDRAAENYEV TDVELEHNHY LQLPQTRHLL  120
ASQRKISEQQ AFEIETTDDS GIMPKASHEF ACRKVGGPLN LGYTCRDQKN HLRSERQREL  180
AYGQA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020147300.13e-92protein FAR1-RELATED SEQUENCE 5-like
TrEMBLT1MUS11e-137T1MUS1_TRIUA; Uncharacterized protein
STRINGTRIUR3_21721-P11e-138(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1832967
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.14e-17FAR1-related sequence 5