PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_21738-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 223aa    MW: 23984.1 Da    PI: 9.5358
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_21738-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY59.56.4e-19106157250
                      --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEE CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvvei 50 
                      +Dg +WrKYGqKe+++s+++++Y+rCt++   +C+++++ +r+++dp+++ +
  TRIUR3_21738-P1 106 EDGQTWRKYGQKEIQNSKHSKAYFRCTHKydqQCMARRQAQRCDDDPDTFRM 157
                      8***************************99999**************98865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.6E-1896156IPR003657WRKY domain
PROSITE profilePS5081115.491100155IPR003657WRKY domain
SuperFamilySSF1182903.4E-18101156IPR003657WRKY domain
SMARTSM007741.8E-20105157IPR003657WRKY domain
PfamPF031061.2E-15106156IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    Send to blast
MAPYEQVMDD LAKGQQFATQ LQGLLRDSPK AGHIMDQILH TFSRAIHAAK AAAAAAASAS  60
ASESEVTDGA SSGGKRKPAA GGGPRKACRT RTQDSSVVTK SMRSLEDGQT WRKYGQKEIQ  120
NSKHSKAYFR CTHKYDQQCM ARRQAQRCDD DPDTFRMKEI TSEPHFIVVK LRGGIGSLQL  180
ICGESPNLVC KGSVVAFKGT TSGVTSSCIV GGREENTVAL VTS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A2e-2795160163OsWRKY45
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF3976130.0EF397613.1 Triticum aestivum cultivar Nongda 3338 WRKY45 transcription factor (WRKY45) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020165252.13e-93probable WRKY transcription factor 70
TrEMBLM7YZ291e-165M7YZ29_TRIUA; Putative WRKY transcription factor 70
STRINGTRIUR3_21738-P11e-166(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP76563549
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.15e-12WRKY DNA-binding protein 46