PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_21913-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Nin-like
Protein Properties Length: 325aa    MW: 36982.4 Da    PI: 8.7597
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_21913-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK84.97.4e-27188237352
           RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                      ++i+led+ +yF+lpi++A+++L+++l++LK++CRqyGI+RWPhRk+ksl
  TRIUR3_21913-P1 188 ASITLEDITQYFHLPIREASRTLKIGLSILKKKCRQYGIPRWPHRKLKSL 237
                      68**********************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151919.122172257IPR003035RWP-RK domain
PfamPF020424.8E-22189237IPR003035RWP-RK domain
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    Send to blast
ALAVFVSTVD RGAVRSAHGY RVAGKGGGCG WERWVEREFA FTPTSAREVP LPADALRLLP  60
ADWRGRPVYR EGQIAGPWRC ILAFDFVAAV APPSVPPPVL CPFRNPRLMC VPSLYNDLTK  120
VFQFQKVEEK VPGLVQCDSD EKLTTSDAKD RVSVKQEAGS DTDEPPQFGE DLLAPAEKQR  180
RAHREYIASI TLEDITQYFH LPIREASRTL KIGLSILKKK CRQYGIPRWP HRKLKSLDSL  240
IHDLEVNLTA APPFVIDDET ERDGVKQEDH MQDEKENQDA IEALAKRKRM LETEKATIQQ  300
KPTLDLMAET KQFRQYVFKR KYRAK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3738352e-96AK373835.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3045A19.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020158589.10.0protein RKD5-like
TrEMBLT1MVA90.0T1MVA9_TRIUA; Uncharacterized protein
STRINGTRIUR3_21913-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP106733142
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35590.13e-49RWP-RK domain-containing protein