PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_22128-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 303aa    MW: 32396.8 Da    PI: 4.7914
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_22128-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY79.34.1e-25111170258
                      --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
                      +Dg+ WrKYGqKe++++++pr Y+rCt++   gCp++++v+++++dp++ +itY g+H++
  TRIUR3_22128-P1 111 EDGFIWRKYGQKEIHNNRHPRLYFRCTYKhdsGCPATRQVQQAEDDPSLYVITYFGDHTC 170
                      8***************************99999*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.5E-25105170IPR003657WRKY domain
SuperFamilySSF1182901.16E-23107171IPR003657WRKY domain
SMARTSM007742.9E-37110172IPR003657WRKY domain
PfamPF031064.5E-25111170IPR003657WRKY domain
PROSITE profilePS5081119.577111168IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    Send to blast
MAALVTPAGC PTVSELVVQG RDSAAVLEAL LRGASSPDNA GIRELAGEIL RCCDRALAAL  60
HAVEGAAVDV SGGRKRKSGP GGADSLTRPR RRMRASGGEK AARVERRRTA EDGFIWRKYG  120
QKEIHNNRHP RLYFRCTYKH DSGCPATRQV QQAEDDPSLY VITYFGDHTC CQGDAAGAVL  180
EAEDVKMQPF VINFGPATAS SGSPWLSSPS DTDDVRRSDS GASGSSQAVC SPEEFGVKEA  240
KVESTSEDSH ATDPAAAELS SSADFSCASP AWNPLSGCLD WDYFGDSSFD CEFMDFDAIP  300
LFQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A7e-23108170668OsWRKY45
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT2852060.0KT285206.1 Triticum aestivum WRKY transcription factor 1 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020177373.10.0WRKY transcription factor 44-like
TrEMBLM7ZW640.0M7ZW64_TRIUA; Putative WRKY transcription factor 70
STRINGTRIUR3_22128-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP46632667
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.13e-24WRKY DNA-binding protein 70