PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_22237-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GeBP
Protein Properties Length: 233aa    MW: 25649 Da    PI: 4.751
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_22237-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57353.56.8e-1732119497
           DUF573   4 qrlwseeDeivlLqGlidfkaktgkspsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 
                       +lw++ Dei+lL G i+f+a+ g  p   d++++ye +++s+s+++++  +  K++rLK Kf +             s++h++ +  ls  +W
  TRIUR3_22237-P1  32 AKLWTDADEIALLNGAISFRARYGIAPRLpDVEGLYESLRDSLSSHINQAKVYYKLKRLKSKFCNTALP-------PTSTPHERRVRALSADLW 118
                      689**********************98877*********************************988766.......778899999999999999 PP

           DUF573  97 g 97 
                      g
  TRIUR3_22237-P1 119 G 119
                      8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.7E-1633119IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    Send to blast
MAAMDMAFEA TSGTRPSASE QSTCVVVLVS MAKLWTDADE IALLNGAISF RARYGIAPRL  60
PDVEGLYESL RDSLSSHINQ AKVYYKLKRL KSKFCNTALP PTSTPHERRV RALSADLWGT  120
EVAPSAEDLP EAEEPEEEDA DEEYTGADVP VAVSVRLPLV SELLGEYWRR NGRAMSGVSL  180
EKGLGLLGAE EGNVAETRWR RQLDAEMRTQ LRRHDLAKEV FGLLSDTIKG LGP
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3741420.0AK374142.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3055K08.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020180064.11e-142probable transcription factor At1g66420
TrEMBLM7ZBI91e-168M7ZBI9_TRIUA; Uncharacterized protein
STRINGTRIUR3_22237-P11e-169(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP26822763
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01370.12e-10DNA-binding storekeeper protein-related transcriptional regulator