PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_22321-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 508aa    MW: 53309.4 Da    PI: 4.5767
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_22321-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY971.3e-30265324159
                      ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                      ++Dg++WrKYGqK+ kg+++pr+YYrCt a  Cpv+k+v+r++ed +++++tYeg+Hnh+
  TRIUR3_22321-P1 265 MNDGCQWRKYGQKVAKGNPCPRAYYRCTVApACPVRKQVQRCQEDMSILITTYEGTHNHP 324
                      58***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081128.908260326IPR003657WRKY domain
SuperFamilySSF1182903.92E-27260326IPR003657WRKY domain
Gene3DG3DSA:2.20.25.804.6E-31260326IPR003657WRKY domain
SMARTSM007744.7E-37265325IPR003657WRKY domain
PfamPF031067.6E-27266324IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 508 aa     Download sequence    Send to blast
MSSSKRKRAD IDLERRDDEV DDGSGDHHPG EAAPRVQKEG QIKEGEAPAK EVVEVVVDRG  60
GDGSKEEIKY GTQQGGVIEE DKKSAAAAAD NDAGDGIDDE EGDGGGTGAE DKHMVEAAPG  120
DGDGDGDHEH TAMAQDELST MQEEMEKMKE ENKMLRRVVD RTVRDYYELQ TKLAAYQKQP  180
ADQEPKETEV FLSLGGTAPA AAVAEAKSKE EQAALRPSVG SDDTDDGREG LGLSLSLRTS  240
SYEDEARRDV VDGGAPDIVT DVGKMNDGCQ WRKYGQKVAK GNPCPRAYYR CTVAPACPVR  300
KQVQRCQEDM SILITTYEGT HNHPLPVGAT AMASTATAGA GAATFMLLSS TTSDAAVSGG  360
PPPASSSYLS PYLQLNSSSK YHSSASPLMS GSMGGGGAQH LSMFGHSSGL SAQPATHLKY  420
PWPPNPSHGG AAGLGGGKRP FWGTGGVDDV TTALPDNAGT MVSDPNQFSA AIATAISNVI  480
GKDGQATRSK EGESSNKWGV VESLPPHE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-202653281476WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3632470.0AK363247.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2013L09.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020173302.10.0probable WRKY transcription factor 9
TrEMBLM7YTI30.0M7YTI3_TRIUA; Putative WRKY transcription factor 9
STRINGTRIUR3_22321-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP80223446
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68150.14e-40WRKY DNA-binding protein 9