PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_22676-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 191aa    MW: 21312.2 Da    PI: 8.2884
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_22676-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM40.86.8e-1361384128
              NAM   4 GfrFhPtdeelvveyLkkkvegkkleleevike.vdiykvePwdLp..kkvkaeek.ew.yfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                      G+ F+Pt  elv +yL ++ve   + l  vi+e vd++++ P  L   ++++ + +  w  fF+ +   +          + g W++ g++k+ 
  TRIUR3_22676-P1   6 GYVFQPTGCELVGYYLMPRVELGGFFLPGVIAEgVDVLSLRPCALSfpENHRRDYSeLWgLFFAAKPAGE----TCPTPGAGGCWEQYGQEKAY 95 
                      999*********************88888865516**********7323433333325567887765543....33333458************ PP

              NAM  93 lskkgel.....vglkktLvfy..kgrapkgektdWvmheyrl 128
                      ++ +g+        +++ +++     + +  ++t+W m+eyrl
  TRIUR3_22676-P1  96 YDGEGSReavalLLTRRRFAYRysWRDGEVISQTRWRMKEYRL 138
                      *9733334556677888888853323445567*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100518.7323167IPR003441NAC domain
SuperFamilySSF1019411.7E-145166IPR003441NAC domain
PfamPF023658.1E-116138IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    Send to blast
NLAAGGYVFQ PTGCELVGYY LMPRVELGGF FLPGVIAEGV DVLSLRPCAL SFPENHRRDY  60
SELWGLFFAA KPAGETCPTP GAGGCWEQYG QEKAYYDGEG SREAVALLLT RRRFAYRYSW  120
RDGEVISQTR WRMKEYRLNR NAAAFRRAHP GPVPPDVVFV VHKVYRKSLI PPPLPPDSNS  180
SEDGSSGSYI V
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020158484.11e-95uncharacterized protein LOC109743803
TrEMBLT1MXD01e-138T1MXD0_TRIUA; Uncharacterized protein
STRINGTRIUR3_22676-P11e-138(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP128912231