PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_22677-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 181aa    MW: 20331.1 Da    PI: 8.6458
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_22677-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM30.11.3e-097100294
              NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLp.k..kvkaeekew.yfFskrdkkyatgkrknratksgyWkatgkdk 90 
                      ++G+ F+Pt  el+++yL +++      +  +i+e  d++++ P++Lp +  +++   + w +fF+ +  + +  + ++   + g W + g++k
  TRIUR3_22677-P1   7 TAGYVFQPTGLELIDHYLVPRAGLGGDIFPGFIDEGvDVLSLPPRELPfRenHIRDYGEVWgFFFAAK-LAGE--TCPTP-GAGGCWVQYGTEK 96 
                      68*******************9888855556777655**********953445555666885555554.3322..23333.4579999999999 PP

              NAM  91 evls 94 
                      +   
  TRIUR3_22677-P1  97 PFAY 100
                      8877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.11E-143128IPR003441NAC domain
PROSITE profilePS5100512.5936151IPR003441NAC domain
PfamPF023653.8E-98122IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    Send to blast
MANPNLTAGY VFQPTGLELI DHYLVPRAGL GGDIFPGFID EGVDVLSLPP RELPFRENHI  60
RDYGEVWGFF FAAKLAGETC PTPGAGGCWV QYGTEKPFAY RYTWKGGAVW SPARWLMKEY  120
RLNRDAAAFR RAHPDPEARD VVFVVHKVYR KPVLPPPADS SSSDSKEEGS ERSMVLKRKR  180
S
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3726482e-83AK372648.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3008D18.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020158486.11e-110NAC transcription factor NAM-B2-like
TrEMBLM7YZX61e-131M7YZX6_TRIUA; Uncharacterized protein
STRINGTRIUR3_22677-P11e-131(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP128912231
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63790.17e-06NAC domain containing protein 102