PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIUR3_23402-P1

Organism

Triticum urartu

Taxonomic ID

4572

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

G2-like

Protein Properties

Length: 431aa MW: 47310.2 Da PI: 8.5808

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIUR3_23402-P1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	31.9	3e-10	211	235	1	25
G2-like 1 kprlrWtpeLHerFveaveqLGGse 25 k+r++W+peLH++Fv a++qLGG++ TRIUR3_23402-P1 211 KTRRCWSPELHRHFVAALHQLGGPQ 235 68*********************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	4.6E-9	208	284	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 431 aa Download sequence Send to blast
MGLDVGEIGM PLDLGLDLRL FVAKTAGRLA KEAPAVDACI RGLEEERRKI EVFRRELPLC 60 ARLLADVIEF MKEEAAKRSE RRDADDNDKR KWMSTAQLWV DSRATDAADP VKEQKKESAL 120 SKPMLLGGAT GVPMAVSCGA MPPPAAPQYF GRDDKIVGTQ GLPALPMISP AANRQFSPPA 180 DDRHQAFAAK FASAMPPPGP GLQTHEQQSR KTRRCWSPEL HRHFVAALHQ LGGPQGVAVS 240 ALTGSDSSEE DDRSWAIIFT FCHGVRYEKM LEKLMTREIL TVAELFALAK KCAKTTEAHA 300 FHHTRTDPMK VGGADHDDIT EKTKTCKAKL VLAVEPQSRK TQQGRLEADK EKVKAVGEGV 360 SKWCPLHRSK GNGLENFREV QNFVEVHRRD VARSNTIVTA ARSEREDMVL AALASAKGIA 420 TGTDGLQVHM V

Sequence ? help Back to Top

Protein Sequence Length: 431 aa Download sequence Send to blast

MGLDVGEIGM PLDLGLDLRL FVAKTAGRLA KEAPAVDACI RGLEEERRKI EVFRRELPLC  60
ARLLADVIEF MKEEAAKRSE RRDADDNDKR KWMSTAQLWV DSRATDAADP VKEQKKESAL  120
SKPMLLGGAT GVPMAVSCGA MPPPAAPQYF GRDDKIVGTQ GLPALPMISP AANRQFSPPA  180
DDRHQAFAAK FASAMPPPGP GLQTHEQQSR KTRRCWSPEL HRHFVAALHQ LGGPQGVAVS  240
ALTGSDSSEE DDRSWAIIFT FCHGVRYEKM LEKLMTREIL TVAELFALAK KCAKTTEAHA  300
FHHTRTDPMK VGGADHDDIT EKTKTCKAKL VLAVEPQSRK TQQGRLEADK EKVKAVGEGV  360
SKWCPLHRSK GNGLENFREV QNFVEVHRRD VARSNTIVTA ARSEREDMVL AALASAKGIA  420
TGTDGLQVHM V

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	JF951944	0.0	JF951944.1 Triticum aestivum clone TaMYB61 MYB-related protein mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020199780.1	1e-145	uncharacterized protein LOC109785601
TrEMBL	M8A5R8	0.0	M8A5R8_TRIUA; Uncharacterized protein
STRING	TRIUR3_23402-P1	0.0	(Triticum urartu)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1817	37	107

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37180.1	8e-22	G2-like family protein