PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_23856-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 254aa    MW: 27856.1 Da    PI: 7.4756
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_23856-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY44.53.1e-142032402359
                      EEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY  23 sYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                      +YYrC+s  +Cp++k+ver++ d  ++++tYe++Hnh 
  TRIUR3_23856-P1 203 GYYRCSSIkDCPARKHVERCRGDAGMLIVTYENDHNHA 240
                      7****9988****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007742.0E-9195241IPR003657WRKY domain
SuperFamilySSF1182903.27E-12202242IPR003657WRKY domain
PROSITE profilePS5081116.57203242IPR003657WRKY domain
PfamPF031064.6E-11203239IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.5E-14203242IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    Send to blast
MEGVEEANRA AVVSCKRLVA RLSLSAGDPF RLAAIPQQQQ QQQQQPQKRI LEQQQRPASS  60
DNKRFHFEPK PASEKPFHIE IPAARSGKEP EVITFSFDNS VCTSSAATSF FTNMSSQLIT  120
MSETSACAPA SRKAAHKADD DGKCHCPKKK SVPEAEGEEG GEDAGGERQG GRYTFRQLLV  180
EEVRAETHQR LSTPKVVINS GGGYYRCSSI KDCPARKHVE RCRGDAGMLI VTYENDHNHA  240
QPLDLATLTA NSEA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3700430.0AK370043.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2104B06.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020156284.11e-95probable WRKY transcription factor 15
TrEMBLM7ZKR60.0M7ZKR6_TRIUA; Putative WRKY transcription factor 7
STRINGTRIUR3_23856-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP127053036
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23320.15e-18WRKY DNA-binding protein 15