PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_24442-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 456aa    MW: 51925.8 Da    PI: 8.7846
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_24442-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.63.3e-09533129
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIar 29
                     +++WT eE+e l ++v ++G g W+tI +
  TRIUR3_24442-P1  5 KQKWTSEEEEALRRGVLKHGAGKWRTIQK 33
                     79*************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466894.37E-10250IPR009057Homeodomain-like
PROSITE profilePS500906.284550IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.605.9E-10550IPR009057Homeodomain-like
PfamPF002494.5E-6533IPR001005SANT/Myb domain
CDDcd116601.02E-13653No hitNo description
Gene3DG3DSA:3.40.630.306.4E-53156267IPR016181Acyl-CoA N-acyltransferase
SuperFamilySSF557297.46E-49157267IPR016181Acyl-CoA N-acyltransferase
PfamPF012334.4E-49157267IPR022676Myristoyl-CoA:protein N-myristoyltransferase, N-terminal
PROSITE patternPS009750244252IPR022678Myristoyl-CoA:protein N-myristoyltransferase, conserved site
Gene3DG3DSA:3.40.630.301.0E-76272449IPR016181Acyl-CoA N-acyltransferase
SuperFamilySSF557291.5E-67278449IPR016181Acyl-CoA N-acyltransferase
PfamPF027992.6E-62290449IPR022677Myristoyl-CoA:protein N-myristoyltransferase, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006499Biological ProcessN-terminal protein myristoylation
GO:0010064Biological Processembryonic shoot morphogenesis
GO:0040007Biological Processgrowth
GO:0005829Cellular Componentcytosol
GO:0005840Cellular Componentribosome
GO:0003677Molecular FunctionDNA binding
GO:0004379Molecular Functionglycylpeptide N-tetradecanoyltransferase activity
Sequence ? help Back to Top
Protein Sequence    Length: 456 aa     Download sequence    Send to blast
MGAPKQKWTS EEEEALRRGV LKHGAGKWRT IQKDPEFSPV LSSRSNIDLK IDKSYKLTDS  60
YAKRALAPMK DPSLKKKDSA KSSKAAKGLG QLSPALDAAE AAAMKVADAE AKSHLANEHM  120
MEVERIGKMA EETESLLELA SELYERCVWV RFVISNHWFT CDLDDDALLA DLYALLAHNY  180
VEDDENMFRF NYSPAFLRWA LRPPSFFRAW HIGVRAKESK KLVAFISGVP ARIRARDDVV  240
RMAEINFLCV HKKLRSKRLA PVLIRGVAPP PPPPPCRYWH RSLNPKKLID VGFSRLGPRM  300
TMSRTVRLYK LPDAPLTPGF RQMELRDVAA VTRLLRAYLA RYVVAPDFDE LDVEHWLLPQ  360
EDVVDSYLVE SPETHEVTDF CSFYTLPSSV LNNANYSTLK AAYSYYNVAV KTPLQQLMND  420
ALIVAKQKNY DVFNALDVME NEGFLKELKQ LVYHDS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4c2x_A1e-11815844972380GLYCYLPEPTIDE N-TETRADECANOYLTRANSFERASE 2
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtAdds a myristoyl group to the N-terminal glycine residue of certain cellular proteins. Can also use decanoyl-CoA and lauroyl-CoA as substrates. {ECO:0000269|PubMed:10734119, ECO:0000269|PubMed:12912986}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAY4891910.0AY489191.1 Triticum aestivum N-myristoyl transferase mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006644589.10.0PREDICTED: glycylpeptide N-tetradecanoyltransferase 1
SwissprotQ9LTR91e-167NMT1_ARATH; Glycylpeptide N-tetradecanoyltransferase 1
TrEMBLM7ZWP60.0M7ZWP6_TRIUA; Glycylpeptide N-tetradecanoyltransferase
STRINGTRIUR3_24442-P10.0(Triticum urartu)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.32e-19telomere repeat binding factor 1
Publications ? help Back to Top
  1. Qi Q, et al.
    Molecular cloning, genomic organization, and biochemical characterization of myristoyl-CoA:protein N-myristoyltransferase from Arabidopsis thaliana.
    J. Biol. Chem., 2000. 275(13): p. 9673-83
    [PMID:10734119]
  2. Nasr F,Filipowicz W
    Characterization of the Saccharomyces cerevisiae cyclic nucleotide phosphodiesterase involved in the metabolism of ADP-ribose 1",2"-cyclic phosphate.
    Nucleic Acids Res., 2000. 28(8): p. 1676-83
    [PMID:10734185]
  3. Pierre M, et al.
    N-myristoylation regulates the SnRK1 pathway in Arabidopsis.
    Plant Cell, 2007. 19(9): p. 2804-21
    [PMID:17827350]
  4. Renna L, et al.
    Golgi traffic and integrity depend on N-myristoyl transferase-1 in Arabidopsis.
    Plant Cell, 2013. 25(5): p. 1756-73
    [PMID:23673980]
  5. Kapos P,Xu F,Meinnel T,Giglione C,Li X
    N-terminal modifications contribute to flowering time and immune response regulations.
    Plant Signal Behav, 2015. 10(10): p. e1073874
    [PMID:26361095]
  6. Chen W, et al.
    NMT1 and NMT3 N-Methyltransferase Activity Is Critical to Lipid Homeostasis, Morphogenesis, and Reproduction.
    Plant Physiol., 2018. 177(4): p. 1605-1628
    [PMID:29777000]