PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_24602-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 205aa    MW: 22617.3 Da    PI: 6.1069
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_24602-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY85.45.1e-272584258
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
             WRKY  2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58
                     dDgy+WrKYGqK++ gs++prsYYrCt++   gC +kkkv+r ++dp + e+tY g+H +
  TRIUR3_24602-P1 25 DDGYTWRKYGQKDILGSRYPRSYYRCTHKnyyGCDAKKKVQRLDDDPFIYEVTYCGDHSC 84
                     8***************************99999*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.4E-271784IPR003657WRKY domain
SuperFamilySSF1182908.63E-252184IPR003657WRKY domain
SMARTSM007743.7E-362486IPR003657WRKY domain
PfamPF031063.8E-252584IPR003657WRKY domain
PROSITE profilePS5081121.6542583IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    Send to blast
RRESGKREMV LVPAQRTGNT ELPPDDGYTW RKYGQKDILG SRYPRSYYRC THKNYYGCDA  60
KKKVQRLDDD PFIYEVTYCG DHSCLTSTTP LLTLPTASTT ISAANSSTVA TGSDLPTRDL  120
PMELVEQTHS AALSTPVKLG ISWMPASFQG ILAGSGTGMG NIANMKMNVS TAPRDTDYPT  180
LDLADVTFNF GSSMDDIFSS YDRHD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A5e-202584968OsWRKY45
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00304DAPTransfer from AT2G40740Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020198551.11e-134uncharacterized protein LOC109784377
TrEMBLT1N2K61e-151T1N2K6_TRIUA; Uncharacterized protein
STRINGTRIUR3_24602-P11e-152(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP97963344
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40740.12e-40WRKY DNA-binding protein 55