PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_24879-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 214aa    MW: 23507 Da    PI: 4.4519
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_24879-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM87.23e-2710108183
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...............kvkaeek...ewyfFskrdkkyatgkrknr 76 
                      +ppGfrFhPt+eelv +yL++kv++++++l ++i+evd+y++ePwdL+                +   +e+   e+yfFs +d+ky++g+r+nr
  TRIUR3_24879-P1  10 VPPGFRFHPTEEELVGYYLARKVAAQTIDL-DIIQEVDLYRIEPWDLQDrcvggkggrgarqvaE---DEQsssELYFFSFKDRKYPSGTRTNR 99 
                      69****************************.99**************945899999998874332...22234499****************** PP

              NAM  77 atksgy..W 83 
                      at++g   W
  TRIUR3_24879-P1 100 ATAAGEegW 108
                      *99885445 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.7E-255104IPR003441NAC domain
PROSITE profilePS5100521.48710185IPR003441NAC domain
PfamPF023656.9E-1211108IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    Send to blast
MEHQQEESCV PPGFRFHPTE EELVGYYLAR KVAAQTIDLD IIQEVDLYRI EPWDLQDRCV  60
GGKGGRGARQ VAEDEQSSSE LYFFSFKDRK YPSGTRTNRA TAAGEEGWVV CRAFQKTTPN  120
QRPSYIFPAY AATPGLGSYY DARPWLHGRG DDLPYLQSAA GATGAGGLGF PSQDVNYSSE  180
DLLDSKQSLF GNIPQLIESP PATALLGCGD DAVL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A8e-24512210110Stress-induced transcription factor NAC1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3730021e-120AK373002.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3017O09.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020184125.11e-100NAC domain-containing protein 30-like
TrEMBLM7ZNI41e-157M7ZNI4_TRIUA; NAC domain-containing protein 7
STRINGTRIUR3_24879-P11e-157(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP25943791
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66300.18e-39NAC domain containing protein 105