PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_25300-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 378aa    MW: 40782.9 Da    PI: 7.7268
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_25300-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY986e-31177235259
                      --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                      +D ++WrKYGqK++kgs++pr+YYrC+s+ gC ++k+vers++dp++++itY+ eHnh+
  TRIUR3_25300-P1 177 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCLARKQVERSRSDPNMLVITYTAEHNHP 235
                      699************************998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081133.315171237IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.3E-30174237IPR003657WRKY domain
SuperFamilySSF1182902.88E-26175237IPR003657WRKY domain
SMARTSM007748.6E-38176236IPR003657WRKY domain
PfamPF031062.2E-25178235IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 378 aa     Download sequence    Send to blast
MDMEEQANAA ATAAREGDLA DVVARANSMP YSAGARRQAP PPPPPCAAGR VMTPCEEERQ  60
RRPANVACGG GEVTFEAPPS TLVVDPYLLA AAGGYGLPQQ HQHQHQQLLA FQISEHACCA  120
AADSDDPMRI SPPPPPPPPA PRHQMITRKN DVRKVVCIPA PPVMSNRAGG GGEVIPSDLW  180
AWRKYGQKPI KGSPYPRGYY RCSSSKGCLA RKQVERSRSD PNMLVITYTA EHNHPWPMQR  240
NVLAGYARAH THTAAKKQQK ISSSSSADNA ASSSSSNSFH VEQINPICGD QLPVSCKMPD  300
STATAGDGGG LLFEGIQPDE VFAELEELET DNNPMTTSAN VYGSRGQQLD AVISMRFGGM  360
KLQYSNYNMR IKTQAHVV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B5e-23149237279Disease resistance protein RRS1
5w3x_D5e-23149237279Disease resistance protein RRS1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020177194.10.0probable WRKY transcription factor 14
SwissprotQ9SA808e-54WRK14_ARATH; Probable WRKY transcription factor 14
TrEMBLM7YU480.0M7YU48_TRIUA; Putative WRKY transcription factor 14
STRINGTRIUR3_25300-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP134662832
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30650.12e-54WRKY DNA-binding protein 14
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]