PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_26222-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C2H2
Protein Properties Length: 153aa    MW: 16390.8 Da    PI: 8.8182
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_26222-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.42.6e-055678123
                     EEETTTTEEESSHHHHHHHHHHT CS
          zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                     ++C+ C+++F++   L  H+r+H
  TRIUR3_26222-P1 56 FECKTCSRRFPSFQALGGHMRRH 78
                     89********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.68E-65279No hitNo description
PfamPF139121.1E-135580IPR007087Zinc finger, C2H2
PROSITE profilePS501579.915678IPR007087Zinc finger, C2H2
SMARTSM003550.00885678IPR015880Zinc finger, C2H2-like
PROSITE patternPS0002805878IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    Send to blast
MAHGKRSRQQ QAETTSVSLM DLDGGDMARI LMLFSGHHNS HGHQGAAAPA SPERVFECKT  60
CSRRFPSFQA LGGHMRRHRA VAAAGAGVER GLSLDLDLGP RGDGKKKTTA VAVGLMIALN  120
VPALALEEEE PADHAKLGLA VEMQFPVVVD FRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010228788.11e-41zinc finger protein ZAT11
TrEMBLM7ZHS31e-107M7ZHS3_TRIUA; Uncharacterized protein
STRINGTRIUR3_26222-P11e-107(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP50137157