PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_26571-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 294aa    MW: 32199.8 Da    PI: 5.3803
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_26571-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY63.14.9e-20130195359
                      -SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SS......STTEEEEEEES--SS- CS
             WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversae......dpkvveitYegeHnhe 59 
                      Dg++WrKYGqK ++ +++prsYY+Ct++   +C+++k v+++++      dp +  ++Y g+H+++
  TRIUR3_26571-P1 130 DGHQWRKYGQKIINHTKHPRSYYKCTYKqeqDCRATKTVQQQQQdagvddDPAMYAVVYYGQHTCK 195
                      9**************************98999********9875222222789***********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.5E-23123195IPR003657WRKY domain
SuperFamilySSF1182902.62E-21124195IPR003657WRKY domain
SMARTSM007742.6E-30128196IPR003657WRKY domain
PROSITE profilePS5081115.652130174IPR003657WRKY domain
PfamPF031067.8E-24130195IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    Send to blast
VCGDDRSAAA LKEMAREQSL VTQLRAVVLP AIQLAGGERA EVVAQMFESI LDCSAKAIAT  60
LKLLRLDHSQ VDDAVLPTAM VDDKTRVRKI VTGDGEKDGD DNAKPLRRQR KRRRLADDSV  120
ALETPVPHYD GHQWRKYGQK IINHTKHPRS YYKCTYKQEQ DCRATKTVQQ QQQDAGVDDD  180
PAMYAVVYYG QHTCKPGQTD AAVVETASTG RCGEGGGEEH ARSNSQCSNI SVTCSSIVVD  240
HHQTTTAASL ESSCNLLDMA GDLATPEVNQ YDQLFDVDSF SPLDLGTAWA TDVS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A3e-161301951069OsWRKY45
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1109113RKRRR
2110114KRRRL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020196408.11e-178WRKY transcription factor 1-like
TrEMBLT1N7Y30.0T1N7Y3_TRIUA; Uncharacterized protein
STRINGTRIUR3_26571-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP32583079
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.12e-17WRKY DNA-binding protein 46