PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIUR3_26781-P1

Organism

Triticum urartu

Taxonomic ID

4572

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bZIP

Protein Properties

Length: 194aa MW: 20947.2 Da PI: 10.2137

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIUR3_26781-P1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	43	9.6e-14	133	178	5	50
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L+ N++L + TRIUR3_26781-P1 133 RRQRRMIKNRESAARSRARKQAYTMELEAEVQKLKDLNQELVRKQA 178 79************************************98865443 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.6E-10	129	190	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.507	131	180	IPR004827	Basic-leucine zipper domain
CDD	cd14707	6.27E-24	133	185	No hit	No description
Gene3D	G3DSA:1.20.5.170	2.6E-13	133	180	No hit	No description
Pfam	PF00170	1.4E-11	133	180	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	2.74E-10	133	179	No hit	No description
PROSITE pattern	PS00036	0	136	151	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 194 aa Download sequence Send to blast
MTLEEFLVKA GVVREIPTAP AVPPPPMQPR PVPVVPKGPS FYGNFPSAND AGAAALGFAP 60 VAMGDLAMGN GLMPRAVGMG GAPLVVQTAV NPVDSGSKGS EDLSSPSEPM PYSFEGIVRG 120 RRTGGGVEKV VERRQRRMIK NRESAARSRA RKQAYTMELE AEVQKLKDLN QELVRKQAEI 180 LEMQKRENNA KMFC

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription activator that mediates abscisic acid (ABA) signaling. Binds specifically to the ABA-responsive element (ABRE) of the EMP1 and RAB16A gene promoters. {ECO:0000269\|PubMed:10611387}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By abscisic acid (ABA). {ECO:0000269\|PubMed:10611387}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AB362818	0.0	AB362818.1 Triticum aestivum Wabi5-1 mRNA for basic region leucine zipper protein, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020177660.1	1e-104	bZIP transcription factor TRAB1-like isoform X1
Swissprot	Q6ZDF3	1e-59	TRAB1_ORYSJ; bZIP transcription factor TRAB1
TrEMBL	M8A5I4	1e-136	M8A5I4_TRIUA; BZIP transcription factor TRAB1
STRING	TRIUR3_26781-P1	1e-137	(Triticum urartu)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP706	38	147

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19290.1	8e-20	ABRE binding factor 4

Publications ? help Back to Top
Kagaya Y,Hobo T,Murata M,Ban A,Hattori T Abscisic acid-induced transcription is mediated by phosphorylation of an abscisic acid response element binding factor, TRAB1. Plant Cell, 2002. 14(12): p. 3177-89 [PMID:12468735] Kobayashi Y, et al. Abscisic acid-activated SNRK2 protein kinases function in the gene-regulation pathway of ABA signal transduction by phosphorylating ABA response element-binding factors. Plant J., 2005. 44(6): p. 939-49 [PMID:16359387] Kobayashi F,Maeta E,Terashima A,Takumi S Positive role of a wheat HvABI5 ortholog in abiotic stress response of seedlings. Physiol Plant, 2008. 134(1): p. 74-86 [PMID:18433415]