PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_27182-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 182aa    MW: 20532.4 Da    PI: 8.8428
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_27182-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY34.54.2e-11155177123
                      ---SS-EEEEEEE--TT-SS-EE CS
             WRKY   1 ldDgynWrKYGqKevkgsefprs 23 
                      ldDgy+WrKYGqK+vk+s +pr 
  TRIUR3_27182-P1 155 LDDGYKWRKYGQKVVKNSLHPRY 177
                      59*******************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.0E-13140177IPR003657WRKY domain
SuperFamilySSF1182902.88E-10147178IPR003657WRKY domain
PROSITE profilePS5081112.955150182IPR003657WRKY domain
SMARTSM007740.0028155182IPR003657WRKY domain
PfamPF031062.1E-7156177IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    Send to blast
QGSQLGMAYC LPNLSVPDHY YTTPVPLSPL QLPFHPKPLQ MPFDQEEALM LSSDHCGLYP  60
LAALPLGRGP TPRENYKDDQ LHIDAFNLMS LPDQVGTSVT ARVGYEGATA CNGYSSNTWW  120
RGSTMLAGEK GKMKVRRKMR EPRFCFQTRS DVDVLDDGYK WRKYGQKVVK NSLHPRYFGS  180
IS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFP0981495e-62FP098149.1 Phyllostachys edulis cDNA clone: bphyem124o14, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020184573.11e-104probable WRKY transcription factor 12
TrEMBLT1N9L61e-134T1N9L6_TRIUA; Uncharacterized protein
STRINGTRIUR3_27182-P11e-135(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP113838130
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44745.14e-32WRKY family protein