PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_27317-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 280aa    MW: 31075.9 Da    PI: 9.7621
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_27317-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.43.5e-2982138259
                      --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                       Dg+nWrKYGqK+vk+s+++rsYYrCt ++C +kkkve++  d++v+ei+Y+g H he
  TRIUR3_27317-P1  82 GDGFNWRKYGQKQVKSSDNSRSYYRCTNSSCLAKKKVEHCP-DGRVIEIIYRGAHSHE 138
                      6****************************************.***************8 PP
2WRKY352.9e-11250270222
                      --SS-EEEEEEE--TT-SS-E CS
             WRKY   2 dDgynWrKYGqKevkgsefpr 22 
                      +Dgy+WrKYGqK vkg+++pr
  TRIUR3_27317-P1 250 SDGYRWRKYGQKIVKGNPNPR 270
                      8*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.806.2E-2670140IPR003657WRKY domain
SuperFamilySSF1182902.09E-2375140IPR003657WRKY domain
PROSITE profilePS5081121.47176140IPR003657WRKY domain
SMARTSM007744.1E-3081139IPR003657WRKY domain
PfamPF031064.2E-2283137IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.7E-9243270IPR003657WRKY domain
SuperFamilySSF1182901.96E-8244270IPR003657WRKY domain
PROSITE profilePS5081113.196244270IPR003657WRKY domain
SMARTSM007740.0027249280IPR003657WRKY domain
PfamPF031063.2E-7251270IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    Send to blast
MSHQAALASV TAQAHIQLQS PASSAYSEGL PSPFPHPITP KAIRPLQQAP SVTQGSIGRP  60
IAERPSSSES KLQHHAAVNI VGDGFNWRKY GQKQVKSSDN SRSYYRCTNS SCLAKKKVEH  120
CPDGRVIEII YRGAHSHEPP QKTRFVKERS LHIYVPPIGD GTLQLVNTEI VESRTPTCKL  180
NQSAAIENSE QQLFCSSDCE GDVGNKSEDE HRSAESQPKR RIVEATTSNL TPVLRTVRER  240
KIIVQAGKMS DGYRWRKYGQ KIVKGNPNPR LVEGNWGYDP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A7e-1366140277Probable WRKY transcription factor 4
2lex_A7e-1366140277Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKR8273960.0KR827396.1 Triticum aestivum WRKY45 transcriptional factor mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020166589.10.0probable WRKY transcription factor 4
TrEMBLM8A8880.0M8A888_TRIUA; Putative WRKY transcription factor 4
STRINGTRIUR3_27317-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP58203455
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13960.14e-45WRKY DNA-binding protein 4