PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_27575-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 255aa    MW: 27613.6 Da    PI: 7.0754
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_27575-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY75.94.8e-2448109259
                      --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-.SSSTTEEEEEEES--SS- CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkvers.aedpkvveitYegeHnhe 59 
                      +Dg++WrKYGqK+++g+ fpr YYrCt++   gC++ k+ve+  + dp ++ ++Y+++H+++
  TRIUR3_27575-P1  48 HDGFQWRKYGQKVIRGNAFPRCYYRCTYHqdhGCSASKHVEQHnSADPPLFRVVYTNDHTCS 109
                      7***************************98999*******986157**************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.8E-2432109IPR003657WRKY domain
SuperFamilySSF1182908.37E-2240109IPR003657WRKY domain
SMARTSM007744.4E-3447110IPR003657WRKY domain
PfamPF031065.9E-2449108IPR003657WRKY domain
PROSITE profilePS5081119.65749106IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009863Biological Processsalicylic acid mediated signaling pathway
GO:0042742Biological Processdefense response to bacterium
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    Send to blast
MLSSSGCPSG SNKRTLQQDC SGGSHAQEHT KKKSRIGMRT DYTYAPYHDG FQWRKYGQKV  60
IRGNAFPRCY YRCTYHQDHG CSASKHVEQH NSADPPLFRV VYTNDHTCSG AAATASDYMA  120
SSMHIQQIAD ASLRKADTEA ERPPRPQQPR SGGGGYAAAI KEEKDAIVSS LLTVIRGSCD  180
VVKSDTAHEG YSSASLASNC YAMSSPSVAG GSREGSSSSS VSPVVLPAPD DMGLGLDFMV  240
ESHWFEPLDL GWFVE
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00619PBMTransfer from AT5G22570Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJQ8063911e-170JQ806391.1 Hordeum vulgare WRKY transcript factor 53 (WRKY53) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020186013.11e-157probable WRKY transcription factor 63
TrEMBLM7YFN40.0M7YFN4_TRIUA; Putative WRKY transcription factor 38
STRINGTRIUR3_27575-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP118143139
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66550.22e-19WRKY DNA-binding protein 67