PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_28039-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family G2-like
Protein Properties Length: 531aa    MW: 59016 Da    PI: 4.2771
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_28039-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like46.39.3e-15137183551
          G2-like   5 rWtpeLHerFveaveqLGGsekAtPktilelmkvkg..LtlehvkSHLQ 51 
                       W++eLHe+F++ave L G+  At ++i + m+ k+  Lt++hv+SHLQ
  TRIUR3_28039-P1 137 LWSSELHEKFLQAVEVL-GPS-ATARNIHQYMNAKDlnLTIQHVASHLQ 183
                      5****************.776.9***********973369********* PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.23003.3E-411114No hitNo description
SuperFamilySSF466891.52E-7136184IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.8E-12137184IPR009057Homeodomain-like
TIGRFAMsTIGR015576.8E-12138183IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 531 aa     Download sequence    Send to blast
MALHGSEPVL VLPFETVEEA LDSLKRGVTK NEELDLVVAE VHPGNAEMDT LVLFHRILNA  60
LEVPLITMCA YDEAVSTRMT LGTCFNVVKP LDTETVNFLR MRALQHRSIK NHRSETEDEK  120
QDLLNANVYS ENLGWFLWSS ELHEKFLQAV EVLGPSATAR NIHQYMNAKD LNLTIQHVAS  180
HLQNQLIARD LITVVIITRF LKLQTQFTHG VASSIWDKYP GMVWPHMEGS SAASAMWYNY  240
PGKRWGQVGE SSAGARVSQT NARPPPVLIH GTKSIWDWYQ ESLQYYNESL SYKREVLPVQ  300
SKALDGYGRE IFINLEREEI SLTEAAGKIV INLESDDMQK DTKDDVHAAV TPQEDTMNEV  360
HTAVTLQKDT MDEAHAAVTP HEVNEVPAAA MGAGYLVDLA GNALLDGIDN YHPAAENAQS  420
EPFSDWDWEE VEKFLTNQME GPGQEQQGIE LVDLLQVDGI SPEELLQVDK AWNQALQQAN  480
PANVVEDEPM AEEPAAGDAP VSDPANQSGV AGNVFGVWSP QFAGDDYGMP F
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020157240.10.0uncharacterized protein LOC109742553
TrEMBLM7Z7L00.0M7Z7L0_TRIUA; Uncharacterized protein
STRINGTRIUR3_28039-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP130171928
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G62670.15e-06response regulator 20