PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_28597-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C2H2
Protein Properties Length: 188aa    MW: 21150 Da    PI: 10.4861
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_28597-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2156.9e-0597119123
                      EEETTTTEEESSHHHHHHHHHHT CS
          zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                      ++C++C+k F ++  L  H++ H
  TRIUR3_28597-P1  97 FSCSYCTKKFYSSQALGGHQNAH 119
                      89******************988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576672.89E-696124No hitNo description
PROSITE profilePS5015711.75997124IPR007087Zinc finger, C2H2
PROSITE patternPS00028099119IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    Send to blast
MEIPCRRLRL GAVVPLASRF PRTCRSRISG LEQAAKGTVQ VLKGHKELRE KRSFDKLKVI  60
GSHYCGYIKD SMGKEEGNID LNLSLQRASS PEWFGYFSCS YCTKKFYSSQ ALGGHQNAHK  120
SERSVAKRTR ELAYTRRQGY VGQLGEASRR EKDPTSNATG SSSHRRASPP EAARRDLIKE  180
DIDLSLKL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020193584.17e-73uncharacterized protein LOC109779381
TrEMBLM7YT321e-136M7YT32_TRIUA; Zinc finger protein 2
STRINGTRIUR3_28597-P11e-137(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP18336274
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57520.13e-15zinc finger protein 2