PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_28659-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 182aa    MW: 19507.6 Da    PI: 8.7257
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_28659-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding22.23.2e-0758852048
                     TTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding 20 GggtWktIartmgkgRtlkqcksrwqkyl 48
                     G+  W++ ++  g++R++k+c++rw +yl
  TRIUR3_28659-P1 58 GTA-WRALPKQAGLTRCGKSCRLRWINYL 85
                     555.***********************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.605.6E-105788IPR009057Homeodomain-like
PfamPF002491.4E-55885IPR001005SANT/Myb domain
SuperFamilySSF466896.13E-1260113IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.607.5E-889114IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    Send to blast
MRKISALKNP GAKGIRRAAG EGSIEWDVRR PAAWGSPSSA RGCGRPRRTR SSTTTSSGTA  60
WRALPKQAGL TRCGKSCRLR WINYLRPDLK RGCFSQEEED HIVALHQILG NRFAEDLGAA  120
NAAALYGQFY GGKEAADEDA GFGAADYSCV LDVPESLGYG ESSSNSSNRN YGGEVGSMLD  180
GE
Functional Description ? help Back to Top
Source Description
UniProtPossible transcription activator in response to an external signal. May be involved in the regulation of flavonoid biosynthesis.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKM0669461e-102KM066946.1 Triticum aestivum R2R3-MYB transcription factor (MYB86) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020186841.19e-30myb-related protein Hv33-like isoform X3
SwissprotP200271e-27MYB3_HORVU; Myb-related protein Hv33
TrEMBLT1NDN01e-130T1NDN0_TRIUA; Uncharacterized protein
STRINGTRIUR3_28659-P11e-130(Triticum urartu)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.14e-27myb domain protein 15