PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_29811-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C2H2
Protein Properties Length: 295aa    MW: 32696.6 Da    PI: 10.3904
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_29811-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.50.000445274123
                     EEETTTTEEESSHHHHHHHHHHT CS
          zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                     +kC  C+k+F+++  +  H + H
  TRIUR3_29811-P1 52 FKCFQCNKTFPTQQAMAGHCSAH 74
                     89**************9999887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501579.5365279IPR007087Zinc finger, C2H2
PROSITE patternPS0002805474IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    Send to blast
MCSRDGISQK AILHCNTSMM GSSSRPSSMM WNEGMVEKKE VARTGKPERT SFKCFQCNKT  60
FPTQQAMAGH CSAHTRASFR KKAVARHTNQ ISNAPARVAL PRNPPRVPQH HNVDAIHFWC  120
SLDHISTRSN PVLPLGIRYV PYVRPTSNQV MVTVPYLELH RHSTMTPVMM DPTRNPALEP  180
LAPSPSMPTS TLLGWRAFVP IYSMPSYGVN VAPPSDALSS TNTPKRTETD LTLQLGSGNK  240
HTQKRTLPLL KSLIMASNIR QGANRRCKLA TDGVDQGNMG ECQADGLDLE LHLFR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLM7ZAI00.0M7ZAI0_TRIUA; Uncharacterized protein
STRINGTRIUR3_29811-P10.0(Triticum urartu)