PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIUR3_29863-P1

Organism

Triticum urartu

Taxonomic ID

4572

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bZIP

Protein Properties

Length: 163aa MW: 18589.9 Da PI: 5.7286

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIUR3_29863-P1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	19.8	1.7e-06	33	68	21	56
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 21 RqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 RqRKk+++ e ++ v +L eN++L +e+ el+ + TRIUR3_29863-P1 33 RQRKKMRLPEVQQLVRSLAVENESLHEEMRELQRAC 68 9*******************************9887 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.4E-4	33	71	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 163 aa Download sequence Send to blast
MAFPASPEMG HVGSFRRPQL TFQAPPPRPA GQRQRKKMRL PEVQQLVRSL AVENESLHEE 60 MRELQRACSA LSKENDKLET RIEQSNSRNE AALKEQKGKQ QQQLDQQQQQ LDQQQQQSPH 120 DSFALPDLNL PAQDGADGSG VTILSDKIWL LYEVFDNLLY LSL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	32	38	RQRKKMR

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK364210	1e-120	AK364210.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2022L02.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020195852.1	1e-60	uncharacterized protein LOC109781670 isoform X2
TrEMBL	M7ZKP6	1e-114	M7ZKP6_TRIUA; Uncharacterized protein
STRING	TRIUR3_29863-P1	1e-115	(Triticum urartu)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3790	29	51