PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_30514-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Trihelix
Protein Properties Length: 234aa    MW: 24976.1 Da    PI: 5.102
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_30514-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix37.56e-121401756
         trihelix 17 meerlrrgklkkplWeevskkmrergferspkqCkekwen 56
                     m+ ++r+++lk+plWe+vs++++e g +rs+k+C+ek+en
  TRIUR3_30514-P1  1 MDAAFREAALKGPLWEQVSRRLAEMGHTRSAKKCREKFEN 40
                     6889***********************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138376.4E-7440No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    Send to blast
MDAAFREAAL KGPLWEQVSR RLAEMGHTRS AKKCREKFEN TPPPAAQHVE HGAKNVIING  60
NGHGNGAAMQ VKASNGAGAA AMFPSPVHAA GNGGNNGTAT NKVESKPEGI AKETAPVQPA  120
VAMNHSYGRN DRRDVYDLDS DSMDEDEEDD FDDDEEEEDQ DGVPGGCNIN MPPAQYDAHF  180
LQRQHQQQQQ QNHNHNHNVV RPNAVNGSGN PPAGNATPSS APATSGTPFL AMVQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3578231e-142AK357823.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1062I19.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020163611.12e-58trihelix transcription factor GTL1-like
TrEMBLM7YR551e-172M7YR55_TRIUA; Uncharacterized protein
STRINGTRIUR3_30514-P11e-173(Triticum urartu)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33240.11e-14GT-2-like 1