PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_31129-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 132aa    MW: 14211 Da    PI: 6.1013
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_31129-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS37.63.3e-1259129302373
             GRAS 302 gaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                      ga+ +er e+ ++  er+++ GF  v ++e++++++++ll++++  g+ v+ e++ lvl+Wk+++ v+++aW
  TRIUR3_31129-P1  59 GADGTERSESGARLAERMRRKGFAGVGFGEDEVAEVRHLLSEHA-TGWGVKREEDMLVLTWKGHAAVFTTAW 129
                      56668999999999******************************.99************************* PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF035141.1E-959129IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    Send to blast
MEQELRSGGA VRAQSTLCFS GALVDGPRIQ QLLLHCAAAL ESNDVTLAQQ AMRTGAVFGA  60
DGTERSESGA RLAERMRRKG FAGVGFGEDE VAEVRHLLSE HATGWGVKRE EDMLVLTWKG  120
HAAVFTTAWA PN
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in plant development. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020154951.13e-45scarecrow-like protein 32
SwissprotQ9SN224e-21SCL32_ARATH; Scarecrow-like protein 32
TrEMBLM7YSK92e-90M7YSK9_TRIUA; Uncharacterized protein
STRINGTRIUR3_31129-P14e-91(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP122273238
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49950.12e-23GRAS family protein