PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_31142-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 466aa    MW: 48967.3 Da    PI: 6.9045
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_31142-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_174.51.4e-23347409163
                      XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                      e+e+krerrkq+NRe+ArrsR+RK++e+eeL +kv+eL++eN aL+ el++lkk ++ +++++
  TRIUR3_31142-P1 347 EREIKRERRKQSNRESARRSRLRKQQECEELSRKVAELTTENNALRTELDQLKKACEDMEAQN 409
                      89********************************************************99987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF165964.1E-783196No hitNo description
Gene3DG3DSA:1.20.5.1702.6E-17344411No hitNo description
PfamPF001704.7E-21347409IPR004827Basic-leucine zipper domain
SMARTSM003387.8E-22347411IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.495349412IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.24E-11350405No hitNo description
CDDcd147029.01E-22352402No hitNo description
PROSITE patternPS000360354369IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 466 aa     Download sequence    Send to blast
MQAFYASGGH PYAAWPAQLM AAAAASGTSY GAPVQFPMYH PGAAMAYYAH ASMAAGVPSP  60
TAEAVAAAAA APVVAEGKGK AKGGDVSPEK GSSAAPSGDD ASQSCGSGSD ESSDTRDYDT  120
DQKDSSAPKK RKSGNTSAEG EPSQAAAVPY AAVESPYQLK GRSASKLPVS APGRAALPNA  180
TPNLNIGIDL WSASQSLAVI PVQGEANPGL ALARCDGVGQ LDSSTPGYIQ LQSQEEHMVV  240
VHQHIAALAA GKECVDDEQL HTSWHPAGVE ELVPPSARTS WCVTTINKES SSSIAAIDEV  300
STQPPALASW RVTNVKSAQP ATPVARSSSV ATDRKSPQGR LARILDEREI KRERRKQSNR  360
ESARRSRLRK QQECEELSRK VAELTTENNA LRTELDQLKK ACEDMEAQNA QLMSQEPAAV  420
TTTLGMSIAA PKVQQHDDEG KLHKKANNNS NGKYVGGSHK LEANPR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1363369RRSRLRK
2363370RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtInteracts specifically with the 8-bp sequence 5'-CACGTGGC-3'in the abscisic acid response element (ABARE). Also binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankWHTHBP1ALZ0.0D64051.1 Triticum aestivum mRNA for HALF-1, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020159007.11e-127DNA-binding protein EMBP-1-like isoform X3
SwissprotP250327e-29EMBP1_WHEAT; DNA-binding protein EMBP-1
TrEMBLM7YR370.0M7YR37_TRIUA; DNA-binding protein EMBP-1
STRINGTRIUR3_31142-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21603692
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.11e-21G-box binding factor 3