PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_31683-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 214aa    MW: 22697.7 Da    PI: 11.9348
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_31683-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY48.71.5e-1581121247
                      --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTE CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkv 47 
                       D ++WrKYGqK++kgs+fp      +s+gCp++k+vers+ dp++
  TRIUR3_31683-P1  81 TDSWAWRKYGQKPIKGSPFPS-----SSKGCPARKQVERSQADPDT 121
                      69******************7.....589**************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081117.28275135IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.1E-1477121IPR003657WRKY domain
SuperFamilySSF1182901.07E-1278122IPR003657WRKY domain
SMARTSM007744.7E-1380126IPR003657WRKY domain
PfamPF031061.9E-1082120IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    Send to blast
MGRPSNSRFR VATDGAVSGG EQKASGDGVS ADRNSPGSPS PPAVPSTSGR RRSLQKRVVT  60
VPLADLNVPR PKGVGEGNTP TDSWAWRKYG QKPIKGSPFP SSSKGCPARK QVERSQADPD  120
TASCWELQRD GEGGPSGQDH LHHLRRDVTV VSPVALGGLT SIRPRSGREG RRVLVVGLAT  180
FITTIVTTPA GRPRVCHTRG LALVGRIHPR VARV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankDQ3235121e-129DQ323512.1 Triticum aestivum WRKY28 mRNA, partial cds.
GenBankEU6696591e-129EU669659.1 Triticum aestivum WRKY28 gene, partial cds.
GenBankHG6703061e-129HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020149507.11e-64probable WRKY transcription factor 65
TrEMBLM8A4421e-149M8A442_TRIUA; Putative WRKY transcription factor 69
STRINGTRIUR3_31683-P11e-150(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP109473341
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58710.26e-25WRKY DNA-binding protein 69