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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
TRIUR3_32308-P1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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| Family |
bHLH |
| Protein Properties |
Length: 350aa MW: 38260.2 Da PI: 6.6284 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| TRIUR3_32308-P1 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 25 | 3.3e-08 | 158 | 200 | 7 | 54 |
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
+ E++RR+r+ ++f L l+P++ +K + a++ A+eYI++L
TRIUR3_32308-P1 158 KKEKQRRQRLSEKFTALMLLIPNR-----TKEDRATVIYDAIEYIQEL 200
57*********************9.....8****************98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 350 aa
Download sequence Send
to blast |
MYHQQCELLM PHEGLDMDAG QSHHLAAGSA VPAELNFHLL SYVDTAVSPQ QPTVEYFFGG 60
ADQPHAQFEQ LAANHQAMTV LRDYYGQYHP ATADAYLPGG GPRTGSSSLV FGAAEEESAY 120
MVGGFQCSPK PRASGSRKRG RGAGSSFHGF PANGGVEKKE KQRRQRLSEK FTALMLLIPN 180
RTKEDRATVI YDAIEYIQEL GRTVEELTLL VEKKRGRREH QGDVVDPAPT LVAGDGECSA 240
GEVAAAVMPA MPAPPQPIRS TYIQRRSKET FVDVRIVEDE VNIKLTKRRR DGCLAAASRA 300
LDDLHLDLVH LSGGKIGDCH IYMFNTKIHP GSPVFASAVA SKLIEVVDEY
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that binds to the E-box-containing promoter regions of the transcription factors TDR and EAT1, activating their expression. May have a role in specifying the cell pattern of the inner anther walls and functioning in meiosis progression. Required for male reproduction (PubMed:24755456). Acts downstream of UDT1 and GAMYB, but upstream of TDR1 and EAT1 in pollen development (PubMed:24894043). {ECO:0000269|PubMed:24755456, ECO:0000269|PubMed:24894043}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK106850 | 1e-119 | AK106850.1 Oryza sativa Japonica Group cDNA clone:002-118-A11, full insert sequence. |
