PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_32840-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family S1Fa-like
Protein Properties Length: 163aa    MW: 18529.4 Da    PI: 10.5348
Description S1Fa-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_32840-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1S1FA51.12.7e-169394070
             S1FA 40 qknlPPrkkkPvskkklkreklkqGvavPGe 70
                      k+lPP+kkkPvskkklkreklkqGv++PGe
  TRIUR3_32840-P1  9 AKTLPPKKKKPVSKKKLKREKLKQGVSAPGE 39
                     69****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF046895.0E-14939IPR006779DNA binding protein S1FA
PfamPF049491.9E-4047139IPR007033RAB6-interacting golgin
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005886Cellular Componentplasma membrane
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    Send to blast
MAEKFAESAK TLPPKKKKPV SKKKLKREKL KQGVSAPGEH PSSLPSGSEE ASEGEGSSRS  60
ALSVFKAKEE QIERKKMEVR DKVFAQLGRV EEESKRLAFI RQELEGMADP TRKEVESIQR  120
RIDTVNRQLK PLSKSCVKKL VSESERMRMK KLEELNKTVD SLY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankDQ6723421e-161DQ672342.1 Triticum aestivum salt response protein mRNA, complete cds.
GenBankFJ4320811e-161FJ432081.1 Triticum aestivum salt response protein (SR) gene, complete cds.
GenBankHQ8352471e-161HQ835247.1 Triticum aestivum hypothetical protein mRNA, complete cds.
GenBankKT2739221e-161KT273922.1 Triticum aestivum salt response protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020159195.18e-76uncharacterized protein LOC109744482
TrEMBLM8AFE91e-109M8AFE9_TRIUA; Uncharacterized protein
STRINGTRIUR3_32840-P11e-110(Triticum urartu)