PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_33467-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 241aa    MW: 26645.3 Da    PI: 4.5458
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_33467-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding31.34.7e-109322247
                     T-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding 22 gtWktIartmgkgRtlkqcksrwqky 47
                     + W++Ia++m+ gRt++++k++w+ +
  TRIUR3_33467-P1  9 R-WSLIANHMP-GRTDNEIKNYWNAH 32
                     4.*********.***********976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129416.926137IPR017930Myb domain
SuperFamilySSF466891.72E-8738IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.0E-12833IPR009057Homeodomain-like
CDDcd001679.72E-8933No hitNo description
PfamPF002499.2E-8933IPR001005SANT/Myb domain
PfamPF066402.5E-45180IPR010588Myb-related protein P, C-terminal
PfamPF066404.8E-1997240IPR010588Myb-related protein P, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    Send to blast
MHFVELAHRW SLIANHMPGR TDNEIKNYWN AHLSRQIHSF RHTYTAGNET TITIDINRLS  60
AASKRRGGRA PRSSTKKQPV PEPTKSKEGC SPVRAISSST SRLPQGDSDQ NQPINNITDD  120
MPCSEEATGM DPVDLNGDVL ETNYANNSMD QIGILEEGRE IEALLSSIGD MPASVLTGID  180
YGGHSPRVED LLDMDWEGFA SHLFDQQAQN DLLQTAEPQI TTGSESDKLE SFVSWLFSDA  240
S
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020178489.11e-128myb-related protein P-like
TrEMBLM7Y4261e-180M7Y426_TRIUA; Myb-related protein P
STRINGTRIUR3_33467-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP7938563
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47460.13e-18myb domain protein 12